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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:315.3 nTPM
HPA Brain:554.5 nTPM
GTEx:315.3 nTPM
Pig:666.4 nTPM
Mouse:570.9 nTPM
Allen mouse:20.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

554.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 410.3
2226 Male, age 75, left hemisphere 521.3
1961 Female, age 42, unknown 299.2
Dorsomedial nucleus
nTPM: 427.1
1989 Male, age 62, unknown 504.3
2041 Female, age 72, unknown 446.3
2017 Female, age 42, unknown 330.7
Lateral hypothalamic area
nTPM: 393.2
2271 Male, age 75, both hemispheres 476.6
1791 Male, age 80, right hemisphere 429.2
2228 Male, age 66, unknown 412.9
2412 Male, age 62, unknown 254.0
Mammillary body
nTPM: 474.0
1923 Female, age 72, unknown 561.6
1945 Male, age 80, right hemisphere 475.7
1948 Female, age 72, unknown 454.9
1834 Female, age 42, unknown 441.3
2413 Male, age 66, unknown 436.6
Paraventricular nucleus
nTPM: 371.1
2700 Male, age 62, unknown 371.1
Preoptic area
nTPM: 349.2
2414 Female, age 72, unknown 379.1
1907 Male, age 80, right hemisphere 340.2
1861 Female, age 42, unknown 328.3
Supraoptic nucleus
nTPM: 554.5
2043 Male, age 62, unknown 618.8
1894 Female, age 72, unknown 609.9
2835 Female, age 72, unknown 434.9
Ventromedial nucleus
nTPM: 309.3
1982 Female, age 72, unknown 330.7
1822 Female, age 42, unknown 287.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

315.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 315.3
Samples: 257

Max nTPM: 588.5
Min nTPM: 177.4
Std nTPM: 64.8
Median nTPM: 311.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 588.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 571.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 550.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 488.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 487.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 470.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 466.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 454.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 437.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 433.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 433.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 432.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 431.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 428.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 423.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 412.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 412.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 410.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 409.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 409.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 406.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 402.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 393.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 390.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 387.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 387.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 386.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 382.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 381.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 381.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 381.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 380.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 379.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 378.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 375.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 374.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 373.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 372.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 372.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 372.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 372.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 371.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 370.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 369.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 368.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 368.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 367.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 367.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 366.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 365.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 365.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 363.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 361.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 360.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 358.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 358.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 357.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 356.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 355.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 355.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 354.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 354.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 353.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 353.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 352.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 352.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 351.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 350.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 349.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 348.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 346.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 345.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 345.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 344.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 344.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 343.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 343.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 343.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 342.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 342.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 342.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 340.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 340.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 337.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 337.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 337.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 336.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 336.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 336.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 335.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 334.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 334.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 333.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 332.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 332.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 331.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 330.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 329.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 328.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 327.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 327.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 326.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 326.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 326.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 324.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 324.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 323.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 322.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 321.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 321.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 321.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 319.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 319.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 319.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 318.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 318.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 317.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 317.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 316.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 316.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 315.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 315.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 315.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 314.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 314.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 313.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 312.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 311.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 311.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 310.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 310.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 309.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 308.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 307.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 306.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 305.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 305.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 305.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 305.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 304.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 304.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 303.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 302.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 302.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 301.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 301.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 301.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 300.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 300.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 299.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 298.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 298.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 298.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 298.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 297.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 296.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 296.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 296.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 295.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 294.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 293.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 292.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 292.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 291.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 291.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 290.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 290.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 288.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 288.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 287.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 286.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 286.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 285.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 285.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 285.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 284.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 284.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 283.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 283.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 282.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 282.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 281.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 281.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 279.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 279.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 278.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 277.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 277.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 276.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 275.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 274.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 274.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 273.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 272.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 272.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 270.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 269.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 269.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 268.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 266.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 266.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 264.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 264.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 263.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 261.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 258.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 257.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 257.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 257.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 256.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 256.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 255.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 254.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 254.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 254.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 253.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 252.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 252.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 251.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 251.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 249.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 248.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 247.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 246.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 246.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 245.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 244.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 244.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 243.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 242.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 240.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 237.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 236.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 233.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 232.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 231.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 230.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 228.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 228.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 228.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 225.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 222.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 222.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 222.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 221.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 219.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 210.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 209.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 206.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 205.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 195.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 194.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 192.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 189.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 189.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 184.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 177.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

666.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 666.4
Samples: 4

Max nTPM: 884.7
Min nTPM: 477.5
Sample A Female 884.7
Sample B Female 736.0
Sample C Male 567.5
Sample D Male 477.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

570.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 570.9
Samples: 4

Max nTPM: 634.6
Min nTPM: 544.6
Sample A Male 551.4
Sample B Male 634.6
Sample C Female 553.0
Sample D Female 544.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

20.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 20.4
532581 Antisense, RP_040810_02_C03, Mouse strain C57BL/6J (56 days, male) 20.4

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