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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
446.6
nTPM
FANTOM5:
1012.1
Scaled Tags Per Million
Pig:
764.7
nTPM
Allen mouse:
14.4
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
446.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 407.4
2301
Female, age 85, both hemispheres
509.0
2188
Female, age 91, both hemispheres
451.7
1984
Male, age 76, both hemispheres
380.5
2090
Male, age 80, both hemispheres
288.5
Dorsal cochlear nucleus nTPM: 358.5
2187
Female, age 91, both hemispheres
446.3
2802
Male, age 74, right hemisphere
434.8
2378
Male, age 80, both hemispheres
327.9
2370
Male, age 61, both hemispheres
323.9
2058
Male, age 76, both hemispheres
259.5
Dorsal tegmental nucleus nTPM: 410.4
2326
Male, age 74, both hemispheres
465.7
1936
Male, age 76, left hemisphere
440.5
2083
Male, age 80, both hemispheres
387.3
2358
Male, age 61, both hemispheres
348.0
Dorsolateral tegmental area nTPM: 414.4
2337
Male, age 61, both hemispheres
450.5
2751
Female, age 85, both hemispheres
435.2
2654
Male, age 80, both hemispheres
417.5
2360
Male, age 74, both hemispheres
401.5
2141
Male, age 76, both hemispheres
367.5
Kolliker-Fuse nucleus nTPM: 439.2
2315
Male, age 76, right hemisphere
534.2
2793
Female, age 91, left hemisphere
391.9
2163
Male, age 80, both hemispheres
391.4
Lateral lemniscal nuclei nTPM: 331.9
2169
Male, age 76, both hemispheres
369.3
2746
Female, age 85, left hemisphere
365.4
2320
Female, age 91, left hemisphere
329.5
2453
Male, age 74, right hemisphere
308.1
2036
Male, age 80, both hemispheres
287.2
Lateral parabrachial nucleus nTPM: 398.3
2792
Male, age 76, both hemispheres
477.7
2013
Male, age 80, both hemispheres
407.5
2139
Female, age 85, right hemisphere
399.4
2790
Male, age 61, both hemispheres
308.4
Lateral vestibular nucleus nTPM: 446.6
2311
Male, age 80, both hemispheres
477.0
2184
Male, age 76, both hemispheres
416.3
Locus coeruleus nTPM: 415.5
2014
Male, age 55, unknown
479.0
2788
Male, age 74, unknown
436.3
2317
Female, age 72, unknown
424.0
2123
Female, age 91, both hemispheres
412.2
1980
Male, age 76, both hemispheres
400.3
2162
Male, age 80, both hemispheres
380.6
2720
Male, age 74, both hemispheres
376.2
Medial parabrachial nucleus nTPM: 409.6
2170
Female, age 91, both hemispheres
482.9
2854
Male, age 80, both hemispheres
445.2
2463
Female, age 85, right hemisphere
403.2
2786
Male, age 76, both hemispheres
369.1
2156
Male, age 61, both hemispheres
347.7
Medial periolivary nuclei nTPM: 371.6
2791
Male, age 74, right hemisphere
475.9
2171
Female, age 85, both hemispheres
404.2
2063
Male, age 76, both hemispheres
355.7
2458
Female, age 91, both hemispheres
316.0
2081
Male, age 80, both hemispheres
306.3
Motor facial nucleus nTPM: 361.9
2365
Male, age 74, right hemisphere
451.6
2795
Female, age 91, both hemispheres
396.4
2697
Female, age 85, both hemispheres
387.2
2062
Male, age 76, both hemispheres
345.2
2126
Male, age 61, both hemispheres
316.3
2327
Male, age 80, both hemispheres
274.8
Motor trigeminal nucleus nTPM: 354.5
2335
Male, age 61, both hemispheres
424.4
2309
Male, age 76, both hemispheres
368.1
2560
Male, age 74, both hemispheres
354.7
2321
Female, age 91, both hemispheres
336.7
2079
Male, age 80, both hemispheres
288.4
Nuclei of the trapezoid body nTPM: 356.0
1983
Male, age 76, both hemispheres
430.0
2159
Male, age 61, both hemispheres
386.7
2735
Female, age 85, both hemispheres
357.6
2166
Male, age 80, both hemispheres
324.1
2368
Female, age 91, both hemispheres
281.5
Nucleus raphe magnus nTPM: 391.0
2051
Male, age 76, both hemispheres
498.5
2455
Male, age 74, both hemispheres
443.9
2160
Male, age 61, both hemispheres
397.5
2172
Female, age 85, both hemispheres
367.8
2328
Male, age 80, both hemispheres
355.4
2459
Female, age 91, both hemispheres
283.1
Paramedian reticular nucleus nTPM: 433.3
2052
Male, age 76, both hemispheres
526.3
2050
Female, age 85, both hemispheres
470.3
2313
Male, age 61, both hemispheres
395.2
2057
Male, age 80, both hemispheres
341.4
Pedunculopontine tegmental nucleus nTPM: 424.0
2334
Male, age 80, both hemispheres
434.3
1921
Female, age 85, both hemispheres
428.0
2338
Male, age 61, both hemispheres
409.6
Pontine nuclei nTPM: 376.7
1863
Male, age 55, unknown
475.2
2454
Male, age 74, left hemisphere
407.5
1968
Male, age 76, left hemisphere
392.6
2319
Female, age 91, both hemispheres
392.4
2787
Female, age 85, both hemispheres
389.0
2109
Female, age 72, unknown
376.9
2115
Male, age 80, left hemisphere
291.9
2727
Male, age 61, right hemisphere
288.1
Pontine raphe nucleus nTPM: 329.6
2853
Male, age 76, midline
411.4
2122
Female, age 85, midline
247.7
Posteroventral cochlear nucleus nTPM: 386.0
2341
Male, age 80, both hemispheres
432.5
2070
Male, age 76, both hemispheres
409.1
2135
Female, age 91, both hemispheres
390.0
2752
Female, age 85, both hemispheres
360.9
2371
Male, age 61, both hemispheres
337.4
Principal sensory trigeminal nucleus nTPM: 357.9
2324
Male, age 76, both hemispheres
440.7
2367
Female, age 91, left hemisphere
358.4
2158
Male, age 61, both hemispheres
331.5
2008
Male, age 80, left hemisphere
300.9
Reticular pontine nucleus, caudal nTPM: 361.2
2457
Female, age 91, both hemispheres
401.8
2559
Male, age 74, both hemispheres
376.0
2092
Male, age 76, both hemispheres
365.1
2332
Male, age 80, right hemisphere
302.0
Reticular pontine nucleus, oral nTPM: 417.0
1939
Male, age 80, both hemispheres
471.7
2167
Male, age 76, both hemispheres
465.5
2361
Male, age 74, both hemispheres
411.5
2366
Female, age 91, both hemispheres
373.1
2012
Female, age 85, both hemispheres
362.9
Reticulotegmental nucleus nTPM: 374.1
2322
Female, age 91, both hemispheres
405.8
2325
Male, age 76, both hemispheres
368.4
2452
Male, age 74, both hemispheres
367.7
2333
Male, age 80, both hemispheres
354.5
Spinal trigeminal nucleus, oral nTPM: 391.0
2164
Male, age 80, both hemispheres
411.3
1978
Male, age 76, both hemispheres
395.4
2737
Female, age 85, both hemispheres
366.3
Subcoeruleus area nTPM: 375.9
2369
Female, age 85, left hemisphere
436.7
1958
Male, age 80, both hemispheres
406.9
2323
Female, age 91, left hemisphere
394.6
2451
Male, age 74, both hemispheres
339.4
2089
Male, age 76, left hemisphere
301.9
Superior olive nTPM: 361.7
2364
Male, age 74, right hemisphere
450.3
1875
Female, age 85, both hemispheres
360.2
2020
Male, age 76, both hemispheres
351.0
2561
Female, age 91, both hemispheres
325.1
2329
Male, age 80, right hemisphere
321.7
Ventral periolivary nuclei nTPM: 328.6
2165
Male, age 80, both hemispheres
387.5
2023
Male, age 76, both hemispheres
372.8
2130
Female, age 85, both hemispheres
284.5
2794
Female, age 91, left hemisphere
269.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 388.6
2359
Male, age 61, both hemispheres
450.8
2840
Female, age 85, both hemispheres
438.5
1959
Male, age 76, both hemispheres
405.4
2449
Male, age 74, both hemispheres
394.3
2161
Male, age 80, both hemispheres
373.8
2456
Female, age 91, both hemispheres
268.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
764.7
Pig sample
Sample description
nTPM
Pons nTPM: 764.7
Samples: 4
Max nTPM: 931.6
Min nTPM: 610.1
Sample A
Female
764.9
Sample B
Female
610.1
Sample C
Male
752.1
Sample D
Male
931.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.