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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
565.1
nTPM
Monaco:
846.9
nTPM
Schmiedel:
270.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
565.1
HPA sample
nTPM
gdT-cell nTPM: 388.4
Samples: 6
Max nTPM: 472.6
Min nTPM: 283.3
P10809_1007
283.3
P10809_1022
471.0
P10809_1041
364.3
P10809_1060
363.3
P10809_1077
375.7
P10809_1098
472.6
MAIT T-cell nTPM: 513.6
Samples: 6
Max nTPM: 641.0
Min nTPM: 403.3
P10809_1006
403.3
P10809_1024
495.2
P10809_1043
457.8
P10809_1062
570.2
P10809_1083
514.3
P10809_1097
641.0
Memory CD4 T-cell nTPM: 524.8
Samples: 6
Max nTPM: 590.0
Min nTPM: 423.6
P10809_1014
423.6
P10809_1026
569.7
P10809_1045
529.2
P10809_1064
523.5
P10809_1086
512.7
P10809_1113
590.0
Memory CD8 T-cell nTPM: 476.5
Samples: 5
Max nTPM: 593.1
Min nTPM: 408.4
P10809_1012
408.4
P10809_1027
477.0
P10809_1046
449.2
P10809_1065
454.7
P10809_1111
593.1
Naive CD4 T-cell nTPM: 553.0
Samples: 6
Max nTPM: 608.4
Min nTPM: 473.8
P10809_1015
473.8
P10809_1030
544.2
P10809_1049
564.7
P10809_1068
587.3
P10809_1085
539.3
P10809_1112
608.4
Naive CD8 T-cell nTPM: 468.3
Samples: 6
Max nTPM: 542.4
Min nTPM: 406.5
P10809_1016
406.5
P10809_1031
519.6
P10809_1050
418.5
P10809_1069
506.1
P10809_1087
416.8
P10809_1110
542.4
T-reg nTPM: 565.1
Samples: 6
Max nTPM: 755.6
Min nTPM: 420.9
P10809_1018
420.9
P10809_1037
480.2
P10809_1056
574.1
P10809_1075
591.8
P10809_1094
568.0
P10809_1106
755.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
846.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 732.2
Samples: 4
Max nTPM: 889.8
Min nTPM: 490.6
RHH5202_R3573
889.8
RHH5230_R3602
729.0
RHH5259_R3631
490.6
RHH5288_R3660
819.4
Effector memory CD8 T-cell nTPM: 555.5
Samples: 4
Max nTPM: 768.7
Min nTPM: 385.6
RHH5203_R3574
768.7
RHH5231_R3603
617.7
RHH5260_R3632
385.6
RHH5289_R3661
449.9
MAIT T-cell nTPM: 846.9
Samples: 4
Max nTPM: 1038.6
Min nTPM: 738.5
RHH5233_R3605
1038.6
RHH5205_R3576
823.7
RHH5262_R3634
738.5
RHH5297_R3663
786.7
Memory CD4 T-cell TFH nTPM: 657.4
Samples: 4
Max nTPM: 793.7
Min nTPM: 528.4
RHH5300_R3666
793.7
RHH5236_R3608
568.5
RHH5265_R3637
738.9
RHH5208_R3579
528.4
Memory CD4 T-cell Th1 nTPM: 672.4
Samples: 4
Max nTPM: 855.8
Min nTPM: 524.6
RHH5210_R3581
654.1
RHH5302_R3668
855.8
RHH5238_R3610
524.6
RHH5267_R3639
655.1
Memory CD4 T-cell Th1/Th17 nTPM: 657.0
Samples: 4
Max nTPM: 691.5
Min nTPM: 579.2
RHH5303_R3669
691.5
RHH5211_R3582
684.4
RHH5239_R3611
672.7
RHH5268_R3640
579.2
Memory CD4 T-cell Th17 nTPM: 784.3
Samples: 4
Max nTPM: 962.6
Min nTPM: 626.9
RHH5304_R3670
962.6
RHH5212_R3583
637.7
RHH5240_R3612
910.0
RHH5269_R3641
626.9
Memory CD4 T-cell Th2 nTPM: 690.9
Samples: 4
Max nTPM: 827.8
Min nTPM: 529.6
RHH5305_R3671
804.3
RHH5213_R3584
529.6
RHH5241_R3613
827.8
RHH5270_R3642
601.8
Naive CD4 T-cell nTPM: 747.5
Samples: 4
Max nTPM: 850.1
Min nTPM: 692.4
RHH5306_R3672
850.1
RHH5214_R3585
692.4
RHH5242_R3614
739.2
RHH5271_R3643
708.4
Naive CD8 T-cell nTPM: 575.2
Samples: 4
Max nTPM: 724.8
Min nTPM: 369.8
RHH5201_R3572
517.2
RHH5229_R3601
369.8
RHH5258_R3630
689.0
RHH5287_R3659
724.8
Non-Vd2 gdTCR nTPM: 605.7
Samples: 4
Max nTPM: 876.5
Min nTPM: 477.0
RHH5235_R3607
477.0
RHH5264_R3636
565.7
RHH5207_R3578
876.5
RHH5299_R3665
503.7
T-reg nTPM: 583.9
Samples: 4
Max nTPM: 710.8
Min nTPM: 532.3
RHH5301_R3667
710.8
RHH5237_R3609
539.3
RHH5266_R3638
532.3
RHH5209_R3580
553.0
Terminal effector memory CD4 T-cell nTPM: 635.8
Samples: 2
Max nTPM: 727.7
Min nTPM: 543.9
RHH5243_R3615
543.9
RHH5272_R3644
727.7
Terminal effector memory CD8 T-cell nTPM: 553.6
Samples: 4
Max nTPM: 775.5
Min nTPM: 391.0
RHH5232_R3604
775.5
RHH5204_R3575
526.5
RHH5261_R3633
391.0
RHH5296_R3662
521.4
Vd2 gdTCR nTPM: 703.4
Samples: 4
Max nTPM: 792.7
Min nTPM: 531.0
RHH5234_R3606
741.4
RHH5206_R3577
792.7
RHH5263_R3635
531.0
RHH5298_R3664
748.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.