HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:72.1 nTPM
HPA Brain:194.8 nTPM
GTEx:72.1 nTPM
FANTOM5:99.8 Scaled Tags Per Million
Pig:114.3 nTPM
Mouse:99.3 nTPM
Allen mouse:7.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024517
Glial cells Low
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 194.8
Sample id Sample description nTPM
Hippocampus
nTPM: 132.8
2529 Female, age 94, left hemisphere 174.0
1898 Male, age 80, left hemisphere 138.8
2621 Female, age 67, right hemisphere 135.5
2148 Female, age 91, left hemisphere 122.6
1911 Female, age 85, right hemisphere 120.8
1855 Male, age 76, left hemisphere 105.2
Dentate gyrus
nTPM: 122.0
2530 Female, age 94, left hemisphere 146.5
2528 Male, age 74, both hemispheres 144.3
2246 Female, age 85, both hemispheres 131.8
2010 Male, age 76, both hemispheres 122.5
1927 Female, age 91, both hemispheres 96.9
2531 Female, age 67, both hemispheres 89.8
Entorhinal gyrus
nTPM: 167.6
1938 Female, age 85, left hemisphere 186.1
2764 Male, age 80, right hemisphere 182.2
1787 Male, age 76, left hemisphere 173.6
2117 Female, age 91, right hemisphere 164.1
2686 Male, age 75, right hemisphere 162.3
2613 Female, age 94, left hemisphere 137.2
Hippocampus, CA1
nTPM: 129.9
2527 Male, age 74, both hemispheres 155.5
2082 Female, age 91, right hemisphere 155.0
2749 Male, age 80, left hemisphere 149.2
1873 Female, age 85, both hemispheres 126.5
2045 Male, age 76, both hemispheres 63.2
Hippocampus, CA2
nTPM: 145.4
2113 Female, age 91, right hemisphere 157.1
2249 Male, age 74, both hemispheres 154.7
1892 Male, age 76, both hemispheres 145.9
2437 Female, age 94, left hemisphere 141.1
1963 Male, age 80, left hemisphere 137.8
1940 Female, age 85, left hemisphere 135.7
Hippocampus, CA3
nTPM: 117.1
1891 Female, age 85, both hemispheres 136.6
1867 Male, age 76, both hemispheres 134.8
2436 Male, age 74, both hemispheres 119.1
2861 Female, age 67, both hemispheres 112.9
2137 Male, age 80, left hemisphere 101.4
2620 Female, age 94, left hemisphere 97.6
Parahippocampal cortex
nTPM: 160.5
1850 Male, age 80, both hemispheres 189.3
1933 Female, age 85, both hemispheres 185.9
2692 Male, age 74, both hemispheres 164.8
1990 Female, age 91, right hemisphere 160.9
2250 Female, age 67, right hemisphere 160.3
2245 Female, age 91, both hemispheres 153.3
2693 Female, age 94, both hemispheres 152.9
2622 Female, age 67, right hemisphere 148.2
2532 Female, age 72, left hemisphere 146.0
2018 Male, age 76, both hemispheres 143.8
Perirhinal gyrus
nTPM: 194.8
1794 Male, age 80, right hemisphere 215.6
1841 Female, age 85, right hemisphere 210.2
1847 Female, age 91, left hemisphere 206.9
2848 Male, age 76, right hemisphere 177.5
2521 Female, age 94, right hemisphere 163.5
Subiculum
nTPM: 153.6
1977 Female, age 85, both hemispheres 191.8
2619 Male, age 74, both hemispheres 169.4
2438 Female, age 94, left hemisphere 156.4
2729 Female, age 91, right hemisphere 143.5
1901 Male, age 80, both hemispheres 133.7
2042 Male, age 76, both hemispheres 126.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 72.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 72.1
Samples: 255

Max nTPM: 146.0
Min nTPM: 30.6
Std nTPM: 19.7
Median nTPM: 69.6
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 146.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 141.6
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 133.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 130.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 126.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 120.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 112.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 111.5
GTEX-1MJK2-0011-R1b-SM-F649H 50-59 years, male 111.3
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 108.5
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 108.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 99.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 99.8
FF:10153-102I9 76 years, female 122.7
FF:10169-103B7 60 years, female 76.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 114.3
Pig sample Sample description nTPM
Subiculum
nTPM: 95.2
Samples: 4

Max nTPM: 115.8
Min nTPM: 82.6
Sample A Female 115.8
Sample B Female 88.5
Sample C Male 93.8
Sample D Male 82.6
Dorsal hippocampus
nTPM: 98.1
Samples: 4

Max nTPM: 118.6
Min nTPM: 75.7
Sample A Female 118.6
Sample B Female 107.3
Sample C Male 90.8
Sample D Male 75.7
Entorhinal cortex
nTPM: 114.3
Samples: 4

Max nTPM: 123.1
Min nTPM: 105.0
Sample A Female 123.1
Sample B Female 119.1
Sample C Male 110.0
Sample D Male 105.0
Ventral hippocampus
nTPM: 97.1
Samples: 4

Max nTPM: 116.1
Min nTPM: 67.7
Sample A Female 99.1
Sample B Female 67.7
Sample C Male 116.1
Sample D Male 105.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 99.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 99.3
Samples: 4

Max nTPM: 109.8
Min nTPM: 86.6
Sample A Male 98.5
Sample B Male 102.1
Sample C Female 86.6
Sample D Female 109.8
Hippocampal formation
nTPM: 82.2
Samples: 4

Max nTPM: 83.9
Min nTPM: 77.7
Sample A Male 77.7
Sample B Male 83.9
Sample C Female 83.6
Sample D Female 83.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.8
74357551 Antisense, RP_051214_01_B03, Mouse strain C57BL/6J (56 days, male) 9.3
68795416 Antisense, RP_041122_01_C04, Mouse strain C57BL/6J (56 days, male) 6.2

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