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  • TISSUE

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  • SCRN1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:86.4 nTPM
HPA Brain:237.6 nTPM
GTEx:86.4 nTPM
Pig:82.8 nTPM
Mouse:156.3 nTPM
Allen mouse:10.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

237.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 185.7
1961 Female, age 42, unknown 191.6
2226 Male, age 75, left hemisphere 179.7
Dorsomedial nucleus
nTPM: 193.1
2041 Female, age 72, unknown 212.7
1989 Male, age 62, unknown 195.3
2017 Female, age 42, unknown 171.3
Lateral hypothalamic area
nTPM: 184.5
1791 Male, age 80, right hemisphere 207.4
2228 Male, age 66, unknown 189.2
2271 Male, age 75, both hemispheres 171.9
2412 Male, age 62, unknown 169.4
Mammillary body
nTPM: 190.6
1923 Female, age 72, unknown 214.2
1948 Female, age 72, unknown 196.1
1945 Male, age 80, right hemisphere 195.8
1834 Female, age 42, unknown 183.9
2413 Male, age 66, unknown 163.2
Paraventricular nucleus
nTPM: 181.6
2700 Male, age 62, unknown 181.6
Preoptic area
nTPM: 183.4
1907 Male, age 80, right hemisphere 195.7
1861 Female, age 42, unknown 183.6
2414 Female, age 72, unknown 170.8
Supraoptic nucleus
nTPM: 237.6
2043 Male, age 62, unknown 262.1
1894 Female, age 72, unknown 259.4
2835 Female, age 72, unknown 191.4
Ventromedial nucleus
nTPM: 203.9
1982 Female, age 72, unknown 222.5
1822 Female, age 42, unknown 185.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

86.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 86.4
Samples: 257

Max nTPM: 162.2
Min nTPM: 43.1
Std nTPM: 16.5
Median nTPM: 85.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 162.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 161.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 147.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 145.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 136.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 131.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 127.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 127.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 126.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 125.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 121.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 120.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 119.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 113.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 112.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 111.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 110.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 109.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 109.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 108.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 107.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 107.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 106.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 105.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 104.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 104.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 104.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 103.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 103.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 99.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 99.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 99.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 99.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 99.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 99.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 98.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 98.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 97.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 97.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 97.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 97.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 97.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 96.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 96.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 96.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 96.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 95.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 94.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 94.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 94.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 94.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 94.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 94.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 94.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 93.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 93.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 93.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 93.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 93.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 93.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 93.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 92.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 92.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 92.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 92.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 92.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 92.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 92.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 92.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 92.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 92.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 92.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 92.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 92.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 92.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 92.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 92.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 91.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 91.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 91.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 91.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 91.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 91.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 90.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 90.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 90.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 90.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 90.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 90.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 90.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 90.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 89.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 89.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 89.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 89.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 89.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 89.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 89.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 89.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 89.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 88.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 88.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 88.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 88.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 87.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 87.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 87.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 87.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 87.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 87.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 87.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 87.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 87.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 87.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 86.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 86.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 86.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 86.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 86.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 86.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 86.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 86.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 86.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 86.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 86.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 85.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 85.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 85.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 85.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 85.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 84.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 84.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 84.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 84.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 84.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 84.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 84.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 84.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 84.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 83.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 83.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 83.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 83.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 83.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 83.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 83.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 82.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 82.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 82.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 82.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 82.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 82.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 82.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 82.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 82.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 82.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 81.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 81.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 81.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 81.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 81.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 81.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 81.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 80.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 80.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 80.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 80.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 80.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 80.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 80.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 80.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 80.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 80.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 80.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 79.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 79.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 79.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 78.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 78.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 78.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 77.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 77.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 77.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 77.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 77.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 77.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 77.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 76.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 76.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 76.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 76.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 76.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 76.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 76.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 76.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 75.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 75.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 75.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 75.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 75.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 75.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 74.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 74.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 74.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 74.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 74.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 73.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 73.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 73.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 73.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 73.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 73.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 72.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 72.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 72.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 72.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 72.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 71.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 71.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 71.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 71.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 71.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 71.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 70.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 69.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 69.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 69.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 69.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 69.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 68.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 68.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 68.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 68.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 67.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 67.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 67.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 67.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 66.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 65.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 65.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 65.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 65.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 64.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 64.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 64.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 64.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 64.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 62.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 61.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 60.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 60.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 60.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 58.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 56.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 55.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 51.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 43.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

82.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 82.8
Samples: 4

Max nTPM: 96.8
Min nTPM: 67.4
Sample A Female 96.8
Sample B Female 84.7
Sample C Male 82.4
Sample D Male 67.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

156.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 156.3
Samples: 4

Max nTPM: 162.1
Min nTPM: 148.0
Sample A Male 160.0
Sample B Male 155.2
Sample C Female 162.1
Sample D Female 148.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 10.7
74357551 Antisense, RP_051214_01_B03, Mouse strain C57BL/6J (56 days, male) 14.0
68795416 Antisense, RP_041122_01_C04, Mouse strain C57BL/6J (56 days, male) 7.4

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