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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
250.4
nTPM
Monaco:
202.8
nTPM
Schmiedel:
114.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
250.4
HPA sample
nTPM
gdT-cell nTPM: 187.0
Samples: 6
Max nTPM: 230.1
Min nTPM: 151.0
P10809_1007
151.0
P10809_1022
230.1
P10809_1041
227.7
P10809_1060
174.2
P10809_1077
151.6
P10809_1098
187.2
MAIT T-cell nTPM: 164.2
Samples: 6
Max nTPM: 185.0
Min nTPM: 145.2
P10809_1006
145.9
P10809_1024
151.2
P10809_1043
185.0
P10809_1062
176.3
P10809_1083
145.2
P10809_1097
181.4
Memory CD4 T-cell nTPM: 192.6
Samples: 6
Max nTPM: 232.7
Min nTPM: 146.8
P10809_1014
167.8
P10809_1026
232.7
P10809_1045
223.8
P10809_1064
191.4
P10809_1086
146.8
P10809_1113
192.9
Memory CD8 T-cell nTPM: 187.4
Samples: 5
Max nTPM: 221.5
Min nTPM: 168.7
P10809_1012
191.5
P10809_1027
179.5
P10809_1046
221.5
P10809_1065
175.8
P10809_1111
168.7
Naive CD4 T-cell nTPM: 177.5
Samples: 6
Max nTPM: 192.2
Min nTPM: 152.0
P10809_1015
152.0
P10809_1030
184.7
P10809_1049
192.2
P10809_1068
188.6
P10809_1085
163.7
P10809_1112
184.0
Naive CD8 T-cell nTPM: 171.5
Samples: 6
Max nTPM: 215.0
Min nTPM: 139.9
P10809_1016
156.9
P10809_1031
168.0
P10809_1050
175.3
P10809_1069
215.0
P10809_1087
139.9
P10809_1110
174.1
T-reg nTPM: 250.4
Samples: 6
Max nTPM: 270.6
Min nTPM: 214.9
P10809_1018
225.4
P10809_1037
259.2
P10809_1056
270.6
P10809_1075
269.6
P10809_1094
214.9
P10809_1106
262.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
202.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 169.1
Samples: 4
Max nTPM: 201.2
Min nTPM: 133.6
RHH5202_R3573
201.2
RHH5230_R3602
198.6
RHH5259_R3631
133.6
RHH5288_R3660
143.1
Effector memory CD8 T-cell nTPM: 200.2
Samples: 4
Max nTPM: 245.4
Min nTPM: 160.2
RHH5203_R3574
245.4
RHH5231_R3603
229.6
RHH5260_R3632
165.5
RHH5289_R3661
160.2
MAIT T-cell nTPM: 174.8
Samples: 4
Max nTPM: 218.2
Min nTPM: 123.8
RHH5233_R3605
160.9
RHH5205_R3576
218.2
RHH5262_R3634
196.2
RHH5297_R3663
123.8
Memory CD4 T-cell TFH nTPM: 170.1
Samples: 4
Max nTPM: 209.7
Min nTPM: 126.3
RHH5300_R3666
126.3
RHH5236_R3608
199.1
RHH5265_R3637
209.7
RHH5208_R3579
145.2
Memory CD4 T-cell Th1 nTPM: 177.4
Samples: 4
Max nTPM: 218.6
Min nTPM: 138.6
RHH5210_R3581
218.6
RHH5302_R3668
138.6
RHH5238_R3610
174.8
RHH5267_R3639
177.6
Memory CD4 T-cell Th1/Th17 nTPM: 172.3
Samples: 4
Max nTPM: 271.0
Min nTPM: 121.5
RHH5303_R3669
129.1
RHH5211_R3582
271.0
RHH5239_R3611
121.5
RHH5268_R3640
167.6
Memory CD4 T-cell Th17 nTPM: 189.9
Samples: 4
Max nTPM: 247.0
Min nTPM: 128.6
RHH5304_R3670
128.6
RHH5212_R3583
247.0
RHH5240_R3612
212.3
RHH5269_R3641
171.8
Memory CD4 T-cell Th2 nTPM: 202.9
Samples: 4
Max nTPM: 247.7
Min nTPM: 149.9
RHH5305_R3671
149.9
RHH5213_R3584
247.7
RHH5241_R3613
206.8
RHH5270_R3642
207.0
Naive CD4 T-cell nTPM: 173.8
Samples: 4
Max nTPM: 215.0
Min nTPM: 146.3
RHH5306_R3672
146.3
RHH5214_R3585
215.0
RHH5242_R3614
162.0
RHH5271_R3643
171.7
Naive CD8 T-cell nTPM: 150.8
Samples: 4
Max nTPM: 172.0
Min nTPM: 117.2
RHH5201_R3572
149.5
RHH5229_R3601
117.2
RHH5258_R3630
172.0
RHH5287_R3659
164.6
Non-Vd2 gdTCR nTPM: 177.2
Samples: 4
Max nTPM: 216.3
Min nTPM: 118.5
RHH5235_R3607
214.5
RHH5264_R3636
159.4
RHH5207_R3578
216.3
RHH5299_R3665
118.5
T-reg nTPM: 183.6
Samples: 4
Max nTPM: 258.1
Min nTPM: 114.9
RHH5301_R3667
114.9
RHH5237_R3609
258.1
RHH5266_R3638
162.2
RHH5209_R3580
199.1
Terminal effector memory CD4 T-cell nTPM: 202.6
Samples: 2
Max nTPM: 253.8
Min nTPM: 151.3
RHH5243_R3615
253.8
RHH5272_R3644
151.3
Terminal effector memory CD8 T-cell nTPM: 174.1
Samples: 4
Max nTPM: 207.3
Min nTPM: 118.7
RHH5232_R3604
207.3
RHH5204_R3575
199.5
RHH5261_R3633
170.8
RHH5296_R3662
118.7
Vd2 gdTCR nTPM: 192.4
Samples: 4
Max nTPM: 224.4
Min nTPM: 132.7
RHH5234_R3606
204.0
RHH5206_R3577
224.4
RHH5263_R3635
208.6
RHH5298_R3664
132.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.