PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:568.1 nTPM
FANTOM5:374.7 Scaled Tags Per Million
Pig:377.9 nTPM
Mouse:255.2 nTPM
Allen mouse:1.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 568.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 496.0
2090 Male, age 80, both hemispheres 566.4
2188 Female, age 91, both hemispheres 547.9
2301 Female, age 85, both hemispheres 498.7
1984 Male, age 76, both hemispheres 370.9
Area postrema
nTPM: 563.3
2799 Male, age 61, both hemispheres 671.4
2306 Male, age 80, both hemispheres 587.6
2054 Male, age 76, both hemispheres 430.7
Dorsal cochlear nucleus
nTPM: 474.8
2187 Female, age 91, both hemispheres 545.9
2802 Male, age 74, right hemisphere 531.6
2370 Male, age 61, both hemispheres 451.1
2378 Male, age 80, both hemispheres 435.6
2058 Male, age 76, both hemispheres 409.7
Dorsal medullary reticular nucleus
nTPM: 456.7
2040 Female, age 85, both hemispheres 494.4
2373 Male, age 61, both hemispheres 471.4
2088 Male, age 76, both hemispheres 404.3
Dorsal motor vagal complex
nTPM: 545.0
2797 Male, age 61, both hemispheres 702.0
2643 Male, age 74, both hemispheres 656.6
2807 Female, age 85, both hemispheres 537.3
2813 Female, age 72, unknown 535.8
2133 Female, age 91, both hemispheres 523.2
2844 Male, age 55, unknown 501.0
2000 Male, age 74, unknown 460.1
2185 Male, age 76, both hemispheres 443.7
Dorsal tegmental nucleus
nTPM: 561.3
2358 Male, age 61, both hemispheres 687.7
2083 Male, age 80, both hemispheres 567.0
2326 Male, age 74, both hemispheres 533.0
1936 Male, age 76, left hemisphere 457.4
Dorsolateral tegmental area
nTPM: 510.6
2337 Male, age 61, both hemispheres 686.3
2654 Male, age 80, both hemispheres 562.3
2141 Male, age 76, both hemispheres 461.3
2751 Female, age 85, both hemispheres 443.3
2360 Male, age 74, both hemispheres 399.8
Gigantocellular reticular nuclei, medullary
nTPM: 441.7
2314 Male, age 61, both hemispheres 565.5
2022 Male, age 76, right hemisphere 464.0
1876 Female, age 85, both hemispheres 452.4
2310 Male, age 80, both hemispheres 437.5
2387 Female, age 91, both hemispheres 401.3
2462 Male, age 74, both hemispheres 329.3
Gigantocellular reticular nuclei, pars
nTPM: 429.0
2084 Female, age 85, both hemispheres 505.0
2336 Male, age 61, both hemispheres 460.5
2706 Male, age 80, both hemispheres 420.8
2330 Male, age 80, both hemispheres 401.9
2168 Male, age 76, both hemispheres 356.8
Inferior olive
nTPM: 524.4
2628 Female, age 91, both hemispheres 594.9
2178 Male, age 61, both hemispheres 518.5
2563 Male, age 74, both hemispheres 509.9
2379 Male, age 80, both hemispheres 499.4
2085 Female, age 85, both hemispheres 499.3
Kolliker-Fuse nucleus
nTPM: 490.1
2793 Female, age 91, left hemisphere 501.4
2163 Male, age 80, both hemispheres 491.0
2315 Male, age 76, right hemisphere 478.0
Lateral lemniscal nuclei
nTPM: 370.5
2169 Male, age 76, both hemispheres 429.1
2320 Female, age 91, left hemisphere 389.9
2453 Male, age 74, right hemisphere 381.1
2746 Female, age 85, left hemisphere 370.0
2036 Male, age 80, both hemispheres 282.6
Lateral medullary reticular nucleus
nTPM: 502.6
2190 Female, age 85, both hemispheres 550.4
2852 Male, age 80, both hemispheres 531.5
2804 Female, age 91, both hemispheres 527.8
2374 Male, age 61, both hemispheres 506.0
2305 Male, age 74, both hemispheres 461.6
2044 Male, age 76, both hemispheres 438.1
Lateral parabrachial nucleus
nTPM: 494.5
2792 Male, age 76, both hemispheres 578.2
2013 Male, age 80, both hemispheres 523.6
2790 Male, age 61, both hemispheres 443.0
2139 Female, age 85, right hemisphere 433.2
Lateral vestibular nucleus
nTPM: 497.1
2311 Male, age 80, both hemispheres 600.4
2184 Male, age 76, both hemispheres 393.8
Locus coeruleus
nTPM: 472.9
2720 Male, age 74, both hemispheres 564.5
2162 Male, age 80, both hemispheres 513.8
2123 Female, age 91, both hemispheres 503.0
2014 Male, age 55, unknown 479.0
2317 Female, age 72, unknown 428.3
1980 Male, age 76, both hemispheres 426.0
2788 Male, age 74, unknown 395.7
Medial olivary nucleus
nTPM: 568.1
1943 Male, age 61, both hemispheres 594.7
2851 Male, age 80, both hemispheres 576.4
1962 Male, age 76, both hemispheres 556.8
2138 Female, age 91, both hemispheres 544.3
Medial parabrachial nucleus
nTPM: 498.7
2170 Female, age 91, both hemispheres 601.1
2854 Male, age 80, both hemispheres 526.2
2156 Male, age 61, both hemispheres 500.0
2786 Male, age 76, both hemispheres 454.1
2463 Female, age 85, right hemisphere 411.7
Medial periolivary nuclei
nTPM: 387.6
2081 Male, age 80, both hemispheres 443.3
2063 Male, age 76, both hemispheres 412.9
2458 Female, age 91, both hemispheres 401.7
2171 Female, age 85, both hemispheres 348.9
2791 Male, age 74, right hemisphere 331.2
Medial vestibular nucleus
nTPM: 466.8
2624 Male, age 61, both hemispheres 546.7
2803 Female, age 91, both hemispheres 546.6
2801 Male, age 74, both hemispheres 455.9
2743 Female, age 85, both hemispheres 440.0
2093 Male, age 80, both hemispheres 426.9
2134 Male, age 76, both hemispheres 384.9
Motor facial nucleus
nTPM: 400.3
2697 Female, age 85, both hemispheres 459.2
2126 Male, age 61, both hemispheres 428.1
2365 Male, age 74, right hemisphere 402.6
2795 Female, age 91, both hemispheres 391.5
2062 Male, age 76, both hemispheres 387.1
2327 Male, age 80, both hemispheres 333.4
Motor hypoglossal nucleus
nTPM: 493.8
2182 Male, age 80, both hemispheres 572.9
2132 Female, age 85, both hemispheres 563.2
2125 Female, age 91, both hemispheres 489.7
2461 Male, age 61, both hemispheres 472.3
2277 Male, age 76, both hemispheres 370.9
Motor trigeminal nucleus
nTPM: 439.3
2335 Male, age 61, both hemispheres 531.8
2321 Female, age 91, both hemispheres 440.4
2309 Male, age 76, both hemispheres 439.1
2560 Male, age 74, both hemispheres 398.1
2079 Male, age 80, both hemispheres 386.9
Nuclei of the trapezoid body
nTPM: 380.8
1983 Male, age 76, both hemispheres 517.6
2166 Male, age 80, both hemispheres 411.5
2159 Male, age 61, both hemispheres 342.9
2368 Female, age 91, both hemispheres 328.1
2735 Female, age 85, both hemispheres 304.0
Nucleus ambiguus
nTPM: 463.7
2071 Male, age 76, both hemispheres 536.5
2096 Female, age 85, both hemispheres 390.9
Nucleus cuneatus
nTPM: 441.3
2808 Female, age 85, both hemispheres 536.4
2805 Female, age 91, both hemispheres 490.4
2381 Male, age 80, both hemispheres 467.7
2380 Male, age 80, both hemispheres 467.4
2562 Male, age 61, both hemispheres 464.4
2564 Male, age 74, both hemispheres 433.1
2376 Male, age 61, both hemispheres 413.3
2100 Male, age 76, both hemispheres 359.1
2131 Male, age 76, both hemispheres 340.4
Nucleus gracilis
nTPM: 566.7
2627 Male, age 74, both hemispheres 586.5
2382 Male, age 80, both hemispheres 560.1
2299 Female, age 85, both hemispheres 553.5
Nucleus raphe magnus
nTPM: 384.4
2051 Male, age 76, both hemispheres 438.1
2455 Male, age 74, both hemispheres 395.1
2328 Male, age 80, both hemispheres 392.4
2459 Female, age 91, both hemispheres 376.2
2172 Female, age 85, both hemispheres 359.3
2160 Male, age 61, both hemispheres 345.1
Nucleus raphe obscurus
nTPM: 520.7
2845 Female, age 85, midline 554.3
2142 Male, age 76, midline 510.0
2800 Male, age 61, midline 497.9
Nucleus raphe pallidus
nTPM: 551.1
1924 Male, age 61, midline 623.2
2183 Male, age 80, midline 591.8
2145 Male, age 76, midline 438.3
Nucleus tractus solitarii
nTPM: 446.7
2191 Female, age 85, both hemispheres 538.2
2307 Male, age 80, both hemispheres 431.9
2144 Female, age 91, right hemisphere 424.6
2656 Male, age 76, both hemispheres 392.3
Paramedian reticular nucleus
nTPM: 451.8
2052 Male, age 76, both hemispheres 521.5
2050 Female, age 85, both hemispheres 444.0
2313 Male, age 61, both hemispheres 432.2
2057 Male, age 80, both hemispheres 409.4
Parvicellular reticular nuclei
nTPM: 416.3
2095 Male, age 76, both hemispheres 458.7
2119 Male, age 80, both hemispheres 453.8
2558 Male, age 74, both hemispheres 336.4
Parvicellular reticular nuclei, medullary
nTPM: 481.7
2189 Female, age 91, both hemispheres 492.5
2181 Male, age 80, left hemisphere 485.1
2091 Female, age 85, both hemispheres 467.5
Pedunculopontine tegmental nucleus
nTPM: 514.8
2338 Male, age 61, both hemispheres 580.2
2334 Male, age 80, both hemispheres 540.1
1921 Female, age 85, both hemispheres 424.1
Peritrigeminal nucleus
nTPM: 512.7
2067 Female, age 85, both hemispheres 584.5
2136 Male, age 76, both hemispheres 500.0
2179 Male, age 61, both hemispheres 453.7
Pontine nuclei
nTPM: 412.8
2319 Female, age 91, both hemispheres 493.3
1863 Male, age 55, unknown 457.1
1968 Male, age 76, left hemisphere 434.1
2115 Male, age 80, left hemisphere 428.6
2454 Male, age 74, left hemisphere 426.6
2787 Female, age 85, both hemispheres 391.2
2109 Female, age 72, unknown 369.8
2727 Male, age 61, right hemisphere 301.5
Pontine raphe nucleus
nTPM: 424.4
2853 Male, age 76, midline 434.5
2122 Female, age 85, midline 414.3
Posteroventral cochlear nucleus
nTPM: 492.5
2341 Male, age 80, both hemispheres 557.9
2135 Female, age 91, both hemispheres 536.4
2371 Male, age 61, both hemispheres 488.9
2070 Male, age 76, both hemispheres 450.9
2752 Female, age 85, both hemispheres 428.5
Prepositus hypoglossal nucleus
nTPM: 460.6
2086 Male, age 80, both hemispheres 467.7
2855 Female, age 85, right hemisphere 453.6
Principal sensory trigeminal nucleus
nTPM: 389.7
2367 Female, age 91, left hemisphere 427.9
2324 Male, age 76, both hemispheres 424.1
2158 Male, age 61, both hemispheres 378.1
2008 Male, age 80, left hemisphere 328.8
Reticular pontine nucleus, caudal
nTPM: 434.4
2457 Female, age 91, both hemispheres 486.8
2559 Male, age 74, both hemispheres 480.8
2092 Male, age 76, both hemispheres 465.7
2332 Male, age 80, right hemisphere 304.4
Reticular pontine nucleus, oral
nTPM: 463.5
2366 Female, age 91, both hemispheres 526.2
2167 Male, age 76, both hemispheres 520.9
1939 Male, age 80, both hemispheres 499.2
2012 Female, age 85, both hemispheres 403.5
2361 Male, age 74, both hemispheres 367.8
Reticulotegmental nucleus
nTPM: 450.9
2452 Male, age 74, both hemispheres 514.0
2322 Female, age 91, both hemispheres 452.9
2333 Male, age 80, both hemispheres 429.6
2325 Male, age 76, both hemispheres 407.1
Spinal trigeminal nucleus, caudal
nTPM: 467.6
2312 Male, age 61, both hemispheres 508.8
2308 Male, age 80, both hemispheres 502.4
2642 Male, age 74, both hemispheres 501.3
2390 Female, age 91, both hemispheres 452.4
2447 Male, age 76, both hemispheres 373.3
Spinal trigeminal nucleus, interpolar
nTPM: 474.9
2033 Male, age 80, both hemispheres 524.3
2066 Male, age 76, right hemisphere 473.6
2386 Female, age 85, both hemispheres 465.0
2625 Male, age 61, both hemispheres 460.4
2389 Female, age 91, both hemispheres 451.1
Spinal trigeminal nucleus, oral
nTPM: 432.0
2164 Male, age 80, both hemispheres 464.2
1978 Male, age 76, both hemispheres 436.8
2737 Female, age 85, both hemispheres 395.1
Spinal vestibular nucleus
nTPM: 523.9
2796 Male, age 61, both hemispheres 574.9
2780 Male, age 80, both hemispheres 532.7
2806 Female, age 85, both hemispheres 527.3
2384 Male, age 74, both hemispheres 517.4
2186 Female, age 91, both hemispheres 499.5
2748 Male, age 76, both hemispheres 491.5
Subcoeruleus area
nTPM: 467.2
2451 Male, age 74, both hemispheres 545.6
2369 Female, age 85, left hemisphere 473.2
2323 Female, age 91, left hemisphere 471.7
1958 Male, age 80, both hemispheres 470.5
2089 Male, age 76, left hemisphere 374.7
Superior olive
nTPM: 386.3
2020 Male, age 76, both hemispheres 488.7
2561 Female, age 91, both hemispheres 405.8
2364 Male, age 74, right hemisphere 368.2
2329 Male, age 80, right hemisphere 347.1
1875 Female, age 85, both hemispheres 321.5
Superior vestibular nucleus
nTPM: 495.4
2383 Male, age 74, both hemispheres 522.8
2015 Male, age 80, both hemispheres 518.2
2061 Male, age 76, both hemispheres 445.3
Ventral medullary reticular nucleus
nTPM: 455.1
2372 Male, age 61, both hemispheres 481.5
2060 Male, age 76, both hemispheres 428.6
Ventral periolivary nuclei
nTPM: 413.0
2023 Male, age 76, both hemispheres 439.9
2165 Male, age 80, both hemispheres 435.7
2794 Female, age 91, left hemisphere 394.4
2130 Female, age 85, both hemispheres 381.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 519.4
2118 Male, age 80, both hemispheres 568.0
2302 Female, age 91, both hemispheres 564.2
2180 Male, age 61, both hemispheres 519.0
2741 Female, age 85, both hemispheres 493.5
1986 Male, age 76, both hemispheres 452.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 420.3
2840 Female, age 85, both hemispheres 465.3
2359 Male, age 61, both hemispheres 463.2
1959 Male, age 76, both hemispheres 427.6
2161 Male, age 80, both hemispheres 424.2
2449 Male, age 74, both hemispheres 381.2
2456 Female, age 91, both hemispheres 360.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 374.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 374.7
FF:10182-103D2 60 years, female 404.2
FF:10165-103B3 76 years, female 345.2
Medulla oblongata
Scaled Tags Per Million: 293.2
FF:10174-103C3 60 years, female 340.5
FF:10155-103A2 76 years, female 277.9
FF:10038-101F2 18-64 years, mixed 261.3
Pons
Scaled Tags Per Million: 213.3
FF:10033-101E6 18-54 years, mixed 213.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 377.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 347.4
Samples: 4

Max nTPM: 409.8
Min nTPM: 287.2
Sample A Female 304.8
Sample B Female 287.2
Sample C Male 387.9
Sample D Male 409.8
Pons
nTPM: 377.9
Samples: 4

Max nTPM: 441.8
Min nTPM: 278.1
Sample A Female 385.1
Sample B Female 278.1
Sample C Male 441.8
Sample D Male 406.7

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 255.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 255.2
Samples: 4

Max nTPM: 274.8
Min nTPM: 234.5
Sample A Male 260.8
Sample B Male 234.5
Sample C Female 274.8
Sample D Female 250.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.1
68441496 Antisense, RP_041214_02_E01, Mouse strain C57BL/6J (56 days, male) 1.1
Pons
Expression energy: 0.9
68441496 Antisense, RP_041214_02_E01, Mouse strain C57BL/6J (56 days, male) 0.9

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