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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

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  • CELL LINE

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  • EVOLUTION

  • RPL35
EVOLUTIONARY LIVER Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Liver & Gallbladder
Evolutionary methods
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Not detected
Hepatocytes: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1736.4 nTPM
HPA:700.9 nTPM
GTEx:1736.4 nTPM
FANTOM5:1120.4 Scaled Tags Per Million
Macaque:269.8 nTPM
Pig:323.1 nTPM
LIVER - SINGLE CELL RNA EXPRESSION
Explore single cell type data

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA006047
Cholangiocytes Not detected
Hepatocytes Not detected



LIVER - PROTEINTALKS DB MS
Median intensity 108180
Sample Intensity
Liver_01
138694
Liver_02
7778
Liver_03
104035
Liver_04
112324
Liver_05
144285
Liver_06
136693
Liver_07
4663
Liver_08
ND
Liver_09
ND
Liver_10
9144

LIVER - MANN MS
Median intensity 12163574
Replicate Intensity
Liver_01
12020739
Liver_02
12163574
Liver_03
12911152

LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

700.9
N/A
Female, age 60
Liver sample 21
nTPM: 724.9
overview
Male, age 54
Liver sample 23
nTPM: 661.7
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 800.1
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 277.3
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 524.2
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 616.6
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 659.9
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 1460.6
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 614.7
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 668.7
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1736.4
GTEx sample id Sample description nTPM
Liver
Average nTPM: 1736.4
Samples: 262

Max nTPM: 5252.5
Min nTPM: 700.7
Std nTPM: 582.3
Median nTPM: 1653.7
GTEX-N7MS-1825-SM-HLJR9 60-69 years, male 5252.5
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 4292.5
GTEX-1IDJH-1526-SM-GA8ZW 70-79 years, male 3595.7
GTEX-111FC-1226-SM-HAV27 60-69 years, male 3429.2
GTEX-13G51-0626-SM-HK7AV 60-69 years, male 3157.1
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 3094.8
GTEX-REY6-1226-SM-48FDR 60-69 years, male 3056.3
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 2999.8
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 2839.4
GTEX-S7SE-1326-SM-HLJRN 50-59 years, male 2832.0
GTEX-1RQED-0726-SM-HLJQL 60-69 years, male 2736.0
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 2711.4
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 2663.8
GTEX-12696-0826-SM-5EGGE 60-69 years, male 2654.7
GTEX-SIU8-1226-SM-HLJRG 50-59 years, male 2603.6
GTEX-13OVL-0726-SM-HAV29 50-59 years, male 2586.6
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 2577.5
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 2541.0
GTEX-14PJO-1726-SM-68719 60-69 years, male 2530.6
GTEX-WL46-1726-SM-HAUZC 50-59 years, male 2529.0
GTEX-16YQH-1126-SM-HAV2D 30-39 years, male 2511.6
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 2501.8
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 2495.5
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 2489.3
GTEX-11ZUS-2526-SM-59872 30-39 years, male 2482.8
GTEX-11EMC-0326-SM-HAV2K 60-69 years, female 2468.4
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 2466.7
GTEX-1HCU6-2026-SM-GA91U 60-69 years, female 2466.6
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 2459.6
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 2450.5
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 2439.2
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 2427.7
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 2417.2
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 2397.7
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 2382.2
GTEX-1LSNL-2026-SM-HLJQ4 50-59 years, male 2320.8
GTEX-15CHQ-0926-SM-HAV1W 60-69 years, male 2312.2
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 2309.9
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 2299.3
GTEX-WK11-1326-SM-4M9QU 50-59 years, male 2299.3
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 2283.7
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 2233.5
GTEX-S32W-1926-SM-4AD63 50-59 years, female 2230.1
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 2225.8
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 2223.9
GTEX-RN64-1826-SM-48FDV 50-59 years, male 2222.6
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 2197.8
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 2194.7
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 2162.3
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 2157.6
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 2150.0
GTEX-18465-1626-SM-7LG6N 50-59 years, male 2128.2
GTEX-1S3DN-1126-SM-HLJQO 50-59 years, male 2122.2
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 2113.7
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 2113.3
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 2111.2
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 2094.2
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 2089.1
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 2085.7
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 2082.9
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 2080.1
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 2048.6
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 2032.6
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 2018.1
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 2006.2
GTEX-1H23P-1826-SM-GA91S 60-69 years, male 2006.0
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 2001.4
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 1991.9
GTEX-1PPGY-2226-SM-F2I29 60-69 years, male 1972.2
GTEX-13OVJ-1026-SM-5IFGI 50-59 years, female 1966.7
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 1965.9
GTEX-X261-1726-SM-4PQYT 50-59 years, male 1962.3
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 1961.6
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 1958.2
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 1954.2
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 1949.9
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 1944.7
GTEX-16MT8-2126-SM-HAV1Q 60-69 years, female 1938.5
GTEX-YECK-1926-SM-4W21H 60-69 years, male 1938.0
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 1925.7
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 1921.8
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 1918.8
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 1917.1
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 1908.4
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 1898.8
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 1898.8
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 1893.8
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 1892.2
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 1891.7
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 1878.6
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 1876.6
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 1872.4
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 1864.5
GTEX-O5YV-0726-SM-EV798 60-69 years, female 1839.1
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 1837.1
GTEX-14A6H-0726-SM-HAV28 30-39 years, male 1836.2
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 1833.2
GTEX-QESD-2026-SM-447BI 20-29 years, male 1828.5
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 1827.4
GTEX-14E7W-1526-SM-6871X 70-79 years, male 1815.1
GTEX-1OJC4-1126-SM-HLJQI 50-59 years, female 1808.1
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 1805.1
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 1796.3
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 1796.2
GTEX-QXCU-1826-SM-HLJS6 50-59 years, male 1793.4
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 1787.1
GTEX-16Z82-1426-SM-HAV2I 60-69 years, male 1769.9
GTEX-1H1CY-1026-SM-HLJS4 60-69 years, female 1769.2
GTEX-1J1OQ-0826-SM-CXZJG 40-49 years, female 1767.0
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 1757.0
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 1756.9
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 1748.5
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 1747.8
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 1744.0
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 1728.7
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 1722.8
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 1719.7
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 1716.2
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 1714.9
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 1709.6
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 1701.6
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 1698.7
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 1698.1
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 1698.1
GTEX-QEL4-1226-SM-447A4 50-59 years, male 1695.8
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 1684.6
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 1676.7
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 1671.8
GTEX-1B933-1226-SM-731DW 50-59 years, female 1670.6
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 1665.4
GTEX-13S7M-1126-SM-HAV2A 60-69 years, female 1657.9
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 1649.4
GTEX-1I1GV-1026-SM-GA8Z8 60-69 years, male 1646.1
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 1639.1
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 1635.6
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 1629.9
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 1628.1
GTEX-WQUQ-1926-SM-4M9QM 60-69 years, male 1621.4
GTEX-13112-1426-SM-5EGH8 50-59 years, male 1616.3
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 1604.6
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 1603.5
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 1598.2
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 1589.4
GTEX-W5X1-0126-SM-HLJRF 40-49 years, female 1585.6
GTEX-144GL-1426-SM-5O9BO 50-59 years, male 1583.8
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 1582.7
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 1582.1
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 1582.0
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 1579.1
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 1570.9
GTEX-15UF7-0426-SM-HAV2G 40-49 years, male 1570.1
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 1565.9
GTEX-1LB8K-1926-SM-HLJQQ 50-59 years, male 1565.0
GTEX-14JG1-1626-SM-664NH 40-49 years, male 1552.1
GTEX-RU72-1426-SM-46MUF 50-59 years, female 1550.4
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 1542.8
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 1542.6
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 1530.0
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 1529.4
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 1524.9
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 1521.0
GTEX-S33H-1626-SM-4AD68 30-39 years, male 1517.1
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 1513.4
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 1512.7
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 1511.4
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 1510.2
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 1508.0
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 1506.5
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 1506.5
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 1502.7
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 1502.6
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 1498.6
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 1497.8
GTEX-14XAO-0226-SM-68728 60-69 years, female 1494.6
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 1490.5
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 1489.2
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 1481.4
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 1478.5
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 1471.2
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 1461.1
GTEX-14BIL-1326-SM-5O9CZ 50-59 years, male 1445.8
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 1442.4
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 1430.0
GTEX-18A66-2026-SM-7189C 60-69 years, male 1429.6
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 1429.3
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 1427.8
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 1415.4
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 1414.5
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 1404.1
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 1403.6
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 1401.5
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 1401.3
GTEX-1H1DF-1326-SM-9WPPR 40-49 years, female 1390.5
GTEX-WWYW-1026-SM-GQ1CM 50-59 years, female 1384.5
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 1382.5
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 1382.5
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 1379.7
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 1374.5
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 1372.6
GTEX-P78B-1326-SM-3P611 40-49 years, female 1357.5
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 1342.6
GTEX-O5YW-0826-SM-HK7A3 50-59 years, male 1338.0
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 1337.1
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 1333.6
GTEX-XPVG-1126-SM-HLJRE 50-59 years, male 1325.6
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 1319.9
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 1284.6
GTEX-1R9PM-0526-SM-F2I1T 20-29 years, male 1283.8
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 1253.5
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 1252.2
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 1249.3
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 1239.6
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 1233.0
GTEX-18A7A-1526-SM-72D69 50-59 years, female 1229.6
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 1228.9
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 1225.4
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 1222.4
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 1211.9
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 1206.6
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 1196.9
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 1192.9
GTEX-17F96-1226-SM-79OK2 70-79 years, male 1189.1
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 1186.6
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 1180.0
GTEX-14PHX-0526-SM-664NW 50-59 years, male 1177.0
GTEX-1399T-0826-SM-5IFES 60-69 years, male 1172.8
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 1169.8
GTEX-13113-1326-SM-5GCOI 60-69 years, female 1162.8
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 1162.0
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 1153.8
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 1140.2
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 1139.1
GTEX-11GSP-0626-SM-5986T 60-69 years, female 1137.8
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 1119.5
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 1115.8
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 1098.6
GTEX-R53T-0326-SM-48FEC 50-59 years, female 1085.2
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 1080.7
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 1079.4
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 1076.5
GTEX-OHPM-0826-SM-HLJRC 50-59 years, male 1071.6
GTEX-Y3IK-0326-SM-HLJRD 50-59 years, female 1068.8
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 1034.1
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 1027.9
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 1020.9
GTEX-OIZF-0826-SM-7MKH9 60-69 years, male 1006.9
GTEX-OXRK-1226-SM-HLJR8 50-59 years, female 980.1
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 958.1
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 950.4
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 905.6
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 901.1
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 887.2
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 876.7
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 829.4
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 826.8
GTEX-Q734-0326-SM-48U15 40-49 years, female 820.7
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 810.5
GTEX-1B932-1426-SM-793AN 40-49 years, female 809.4
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 773.0
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 732.4
GTEX-17HHE-0126-SM-79398 50-59 years, male 721.8
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 700.7
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1120.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 1120.4
FF:10018-101C9 64,69,70 years, mixed 1120.4

LIVER - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

269.8
Macaque sample Sample description nTPM
Liver
nTPM: 269.8
Samples: 3

Max nTPM: 363.3
Min nTPM: 212.6
Sample B 363.3
Sample C 212.6
Sample D 233.4

LIVER - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

323.1
Pig sample Sample description nTPM
Liver
nTPM: 323.1
Samples: 4

Max nTPM: 350.0
Min nTPM: 273.7
Sample A Female 339.5
Sample B Female 273.7
Sample C Male 329.3
Sample D Male 350.0

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