HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:1007.0 nTPM
HPA Brain:318.7 nTPM
GTEx:1007.0 nTPM
FANTOM5:310.7 Scaled Tags Per Million
Pig:1.3 nTPM
Mouse:1766.5 nTPM
Allen mouse:5.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 318.7
Sample id Sample description nTPM
Hippocampus
nTPM: 306.1
2529 Female, age 94, left hemisphere 391.1
1898 Male, age 80, left hemisphere 308.7
2621 Female, age 67, right hemisphere 308.3
1911 Female, age 85, right hemisphere 279.5
1855 Male, age 76, left hemisphere 276.1
2148 Female, age 91, left hemisphere 273.1
Dentate gyrus
nTPM: 318.7
2530 Female, age 94, left hemisphere 436.4
2010 Male, age 76, both hemispheres 359.0
2531 Female, age 67, both hemispheres 301.4
2528 Male, age 74, both hemispheres 301.3
2246 Female, age 85, both hemispheres 286.8
1927 Female, age 91, both hemispheres 227.6
Entorhinal gyrus
nTPM: 255.1
2117 Female, age 91, right hemisphere 340.1
1787 Male, age 76, left hemisphere 292.4
2764 Male, age 80, right hemisphere 246.9
2686 Male, age 75, right hemisphere 237.2
1938 Female, age 85, left hemisphere 225.0
2613 Female, age 94, left hemisphere 188.8
Hippocampus, CA1
nTPM: 297.2
2045 Male, age 76, both hemispheres 312.4
2749 Male, age 80, left hemisphere 305.3
2082 Female, age 91, right hemisphere 297.8
1873 Female, age 85, both hemispheres 288.0
2527 Male, age 74, both hemispheres 282.8
Hippocampus, CA2
nTPM: 292.0
2437 Female, age 94, left hemisphere 314.8
2249 Male, age 74, both hemispheres 310.7
1963 Male, age 80, left hemisphere 308.1
2113 Female, age 91, right hemisphere 293.5
1940 Female, age 85, left hemisphere 267.2
1892 Male, age 76, both hemispheres 257.7
Hippocampus, CA3
nTPM: 283.3
2436 Male, age 74, both hemispheres 384.4
1867 Male, age 76, both hemispheres 311.6
2861 Female, age 67, both hemispheres 291.7
1891 Female, age 85, both hemispheres 253.1
2137 Male, age 80, left hemisphere 251.5
2620 Female, age 94, left hemisphere 207.5
Parahippocampal cortex
nTPM: 251.7
2018 Male, age 76, both hemispheres 347.5
2250 Female, age 67, right hemisphere 319.3
2245 Female, age 91, both hemispheres 294.4
2532 Female, age 72, left hemisphere 263.1
1990 Female, age 91, right hemisphere 253.0
1933 Female, age 85, both hemispheres 236.4
2622 Female, age 67, right hemisphere 233.3
1850 Male, age 80, both hemispheres 211.4
2692 Male, age 74, both hemispheres 200.9
2693 Female, age 94, both hemispheres 157.6
Perirhinal gyrus
nTPM: 235.1
2521 Female, age 94, right hemisphere 261.5
1841 Female, age 85, right hemisphere 254.1
1794 Male, age 80, right hemisphere 238.3
1847 Female, age 91, left hemisphere 232.4
2848 Male, age 76, right hemisphere 188.9
Subiculum
nTPM: 289.4
2042 Male, age 76, both hemispheres 321.1
1977 Female, age 85, both hemispheres 317.7
2438 Female, age 94, left hemisphere 311.4
2729 Female, age 91, right hemisphere 269.4
2619 Male, age 74, both hemispheres 259.5
1901 Male, age 80, both hemispheres 257.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 1007.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1007.0
Samples: 255

Max nTPM: 2537.3
Min nTPM: 331.1
Std nTPM: 334.4
Median nTPM: 950.0
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 2537.3
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 2296.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2154.3
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 2078.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1906.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1782.8
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 1768.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1750.6
GTEX-1RNSC-0011-R1b-SM-F342D 60-69 years, male 1730.3
GTEX-1PPGY-0011-R1b-SM-G8LN3 60-69 years, male 1715.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1686.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 310.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 310.7
FF:10169-103B7 60 years, female 329.2
FF:10153-102I9 76 years, female 292.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 1.3
Pig sample Sample description nTPM
Subiculum
nTPM: 1.2
Samples: 4

Max nTPM: 2.4
Min nTPM: 0.2
Sample A Female 0.2
Sample B Female 1.1
Sample C Male 2.4
Sample D Male 1.1
Dorsal hippocampus
nTPM: 1.2
Samples: 4

Max nTPM: 1.8
Min nTPM: 0.6
Sample A Female 1.8
Sample B Female 1.5
Sample C Male 0.6
Sample D Male 0.9
Entorhinal cortex
nTPM: 0.9
Samples: 4

Max nTPM: 1.7
Min nTPM: 0.3
Sample A Female 0.6
Sample B Female 0.9
Sample C Male 0.3
Sample D Male 1.7
Ventral hippocampus
nTPM: 1.3
Samples: 4

Max nTPM: 1.4
Min nTPM: 1.0
Sample A Female 1.0
Sample B Female 1.4
Sample C Male 1.4
Sample D Male 1.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 1766.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1766.5
Samples: 4

Max nTPM: 1823.3
Min nTPM: 1702.0
Sample A Male 1785.0
Sample B Male 1823.3
Sample C Female 1755.6
Sample D Female 1702.0
Hippocampal formation
nTPM: 1746.2
Samples: 4

Max nTPM: 1930.7
Min nTPM: 1632.0
Sample A Male 1701.2
Sample B Male 1720.7
Sample C Female 1632.0
Sample D Female 1930.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.7
69818344 Antisense, RP_050510_04_H07, Mouse strain C57BL/6J (56 days, male) 5.7

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