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  • RPLP1
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1156.3 nTPM
HPA Brain:497.8 nTPM
GTEx:1156.3 nTPM
FANTOM5:365.3 Scaled Tags Per Million
Pig:3.8 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - Annotated protein expression
Pending normal tissue analysis

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

497.8
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 381.9
1981 Female, age 72, midline 472.5
2565 Male, age 75, midline 416.5
2194 Female, age 79, both hemispheres 385.4
2816 Male, age 47, midline 325.2
2048 Male, age 55, midline 309.6
Cervical spinal cord, dorsal horn
nTPM: 390.6
2069 Male, age 47, both hemispheres 530.8
2173 Female, age 72, unknown 473.3
2296 Male, age 66, both hemispheres 431.6
1877 Male, age 55, unknown 357.0
2297 Male, age 75, both hemispheres 287.1
2721 Male, age 90, both hemispheres 263.6
Cervical spinal cord, ventral horn
nTPM: 497.8
2480 Male, age 75, both hemispheres 681.7
2809 Male, age 90, both hemispheres 617.8
2098 Female, age 72, unknown 538.5
2068 Male, age 55, unknown 475.6
2295 Male, age 66, both hemispheres 421.3
2820 Female, age 79, both hemispheres 252.0

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1156.3
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1156.3
Samples: 204

Max nTPM: 2930.8
Min nTPM: 420.8
Std nTPM: 383.6
Median nTPM: 1096.3
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 2930.8
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 2422.9
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 2205.9
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 2174.4
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 2135.4
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 2046.5
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 2024.2
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 2001.1
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 1990.3
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 1937.6
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 1916.3
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 1906.2
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 1886.3
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 1883.6
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 1857.6
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 1844.2
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 1794.0
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 1758.0
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 1730.9
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 1674.0
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 1631.6
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1630.3
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 1612.8
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 1604.5
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 1592.2
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 1575.3
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1550.4
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1539.4
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1514.1
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 1498.3
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1498.2
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 1494.8
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1488.4
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 1471.0
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1469.7
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 1464.4
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 1457.8
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 1456.3
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 1416.1
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 1415.2
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1412.7
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 1409.2
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1400.0
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1399.8
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 1396.7
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 1373.4
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1370.8
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 1360.3
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 1358.5
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 1348.6
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 1348.4
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1342.9
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 1309.2
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 1306.5
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1300.6
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1296.4
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1286.8
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 1280.3
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 1276.8
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1271.2
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 1261.3
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1257.9
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 1251.9
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1244.5
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1234.2
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 1223.3
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 1222.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1219.1
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 1216.7
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 1214.0
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1211.2
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1209.4
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 1208.8
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 1207.6
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 1205.6
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 1200.5
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 1190.7
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1189.1
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 1187.1
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1186.4
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1179.5
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 1172.4
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 1168.7
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 1162.7
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 1161.7
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 1160.9
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 1160.4
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 1155.3
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 1154.4
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1152.4
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1147.2
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 1146.4
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 1142.7
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 1140.1
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 1137.2
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1136.6
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1133.6
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 1129.6
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 1129.4
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 1128.8
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1101.1
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1098.4
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 1094.3
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 1092.9
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 1088.5
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1086.0
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1082.8
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 1073.2
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 1071.0
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 1064.4
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 1059.4
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 1048.3
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 1047.6
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 1047.6
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 1041.5
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1038.4
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 1037.0
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 1033.4
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 1029.5
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1029.5
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 1027.4
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 1026.1
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 999.6
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 996.0
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 995.5
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 992.7
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 990.6
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 989.2
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 988.7
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 986.5
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 985.3
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 984.7
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 979.6
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 977.2
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 971.3
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 968.4
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 965.7
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 965.4
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 963.2
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 962.3
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 961.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 958.0
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 946.6
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 946.5
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 944.8
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 943.2
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 940.2
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 934.6
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 932.9
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 927.5
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 906.3
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 900.0
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 892.6
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 892.0
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 890.2
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 888.9
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 888.3
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 886.3
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 880.2
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 872.6
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 862.3
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 859.3
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 848.3
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 829.3
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 826.3
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 810.5
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 807.4
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 805.4
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 804.9
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 802.4
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 799.5
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 798.0
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 796.7
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 794.7
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 791.3
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 786.8
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 774.8
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 768.7
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 759.0
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 753.0
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 749.5
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 744.1
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 739.5
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 709.6
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 708.6
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 707.1
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 707.0
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 703.7
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 696.1
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 688.1
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 687.8
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 683.1
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 668.8
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 666.8
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 666.3
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 660.8
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 660.7
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 627.7
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 608.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 608.0
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 593.8
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 565.2
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 520.1
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 420.8
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

365.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 365.3
FF:10181-103D1 60 years, female 494.5
FF:10159-103A6 76 years, female 236.1

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3.8
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 3.8
Samples: 4

Max nTPM: 6.2
Min nTPM: 2.4
Sample A Female 6.2
Sample B Female 2.9
Sample C Male 3.6
Sample D Male 2.4
Ventral spinal cord
nTPM: 3.2
Samples: 4

Max nTPM: 4.9
Min nTPM: 1.7
Sample A Female 2.1
Sample B Female 4.9
Sample C Male 1.7
Sample D Male 4.2

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