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  • TISSUE

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  • RPLP1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:856.1 nTPM
HPA Brain:393.9 nTPM
GTEx:856.1 nTPM
Pig:2.4 nTPM
Mouse:1326.0 nTPM
Allen mouse:3.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

393.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 320.7
1961 Female, age 42, unknown 343.7
2226 Male, age 75, left hemisphere 297.6
Dorsomedial nucleus
nTPM: 277.9
2017 Female, age 42, unknown 303.5
1989 Male, age 62, unknown 303.1
2041 Female, age 72, unknown 227.0
Lateral hypothalamic area
nTPM: 370.6
2412 Male, age 62, unknown 424.1
2271 Male, age 75, both hemispheres 361.0
1791 Male, age 80, right hemisphere 351.0
2228 Male, age 66, unknown 346.5
Mammillary body
nTPM: 305.1
1945 Male, age 80, right hemisphere 330.6
2413 Male, age 66, unknown 319.1
1834 Female, age 42, unknown 310.4
1948 Female, age 72, unknown 308.0
1923 Female, age 72, unknown 257.1
Paraventricular nucleus
nTPM: 325.3
2700 Male, age 62, unknown 325.3
Preoptic area
nTPM: 316.7
2414 Female, age 72, unknown 360.8
1861 Female, age 42, unknown 360.1
1907 Male, age 80, right hemisphere 229.2
Supraoptic nucleus
nTPM: 393.9
2043 Male, age 62, unknown 407.6
2835 Female, age 72, unknown 389.5
1894 Female, age 72, unknown 384.6
Ventromedial nucleus
nTPM: 294.5
1982 Female, age 72, unknown 355.1
1822 Female, age 42, unknown 233.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

856.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 856.1
Samples: 257

Max nTPM: 3596.0
Min nTPM: 212.1
Std nTPM: 360.8
Median nTPM: 798.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 3596.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 2287.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 2249.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 1993.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 1839.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 1783.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 1773.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 1758.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 1756.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1603.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 1508.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 1418.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 1370.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 1370.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 1364.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 1364.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 1345.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 1337.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 1333.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 1331.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 1308.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 1300.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 1293.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 1293.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 1288.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 1279.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1278.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 1267.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 1257.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 1252.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 1248.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 1244.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 1216.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 1214.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 1184.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 1182.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 1170.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 1156.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 1148.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 1148.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 1141.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 1130.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 1111.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 1102.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 1101.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 1091.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 1091.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 1087.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 1071.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 1063.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 1061.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 1052.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 1050.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 1048.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 1037.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 1035.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 1016.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 1014.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 1013.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 1004.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 997.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 995.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 994.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 990.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 986.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 980.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 976.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 957.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 953.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 950.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 946.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 936.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 932.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 931.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 926.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 918.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 913.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 913.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 910.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 901.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 896.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 895.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 894.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 889.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 886.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 885.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 884.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 878.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 877.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 875.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 875.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 871.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 869.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 868.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 867.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 866.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 861.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 860.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 859.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 859.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 857.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 856.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 856.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 852.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 847.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 847.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 845.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 840.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 836.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 834.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 834.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 834.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 834.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 833.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 832.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 829.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 828.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 828.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 827.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 826.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 825.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 821.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 817.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 813.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 811.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 809.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 806.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 800.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 798.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 797.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 794.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 788.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 781.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 781.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 778.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 773.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 766.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 762.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 760.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 757.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 757.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 756.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 755.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 753.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 753.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 750.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 741.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 735.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 733.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 732.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 728.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 728.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 726.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 725.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 725.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 722.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 718.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 714.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 713.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 712.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 712.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 712.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 712.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 708.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 705.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 701.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 698.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 689.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 688.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 678.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 675.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 674.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 673.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 670.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 669.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 666.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 663.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 662.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 660.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 659.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 659.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 658.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 656.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 652.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 644.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 644.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 636.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 633.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 631.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 628.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 627.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 625.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 624.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 623.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 623.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 621.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 621.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 616.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 614.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 614.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 614.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 612.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 610.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 609.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 606.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 601.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 597.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 593.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 592.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 592.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 591.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 585.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 582.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 582.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 581.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 580.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 572.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 570.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 564.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 562.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 556.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 553.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 551.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 551.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 547.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 544.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 544.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 539.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 531.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 529.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 529.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 526.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 524.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 520.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 519.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 516.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 515.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 512.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 511.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 499.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 495.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 480.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 476.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 473.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 458.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 456.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 452.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 437.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 432.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 411.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 409.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 400.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 377.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 367.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 321.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 287.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 212.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 2.4
Samples: 4

Max nTPM: 3.8
Min nTPM: 0.5
Sample A Female 0.5
Sample B Female 2.0
Sample C Male 3.3
Sample D Male 3.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1326.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 1326.0
Samples: 4

Max nTPM: 1799.4
Min nTPM: 992.7
Sample A Male 1448.8
Sample B Male 1799.4
Sample C Female 992.7
Sample D Female 1063.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.4
69818344 Antisense, RP_050510_04_H07, Mouse strain C57BL/6J (56 days, male) 3.4

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