HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:90.2 nTPM
HPA Brain:36.4 nTPM
GTEx:90.2 nTPM
FANTOM5:25.4 Scaled Tags Per Million
Pig:37.0 nTPM
Mouse:65.1 nTPM
Allen mouse:0.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041368Antibody HPA057079
Glial cells MediumHigh
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 36.4
Sample id Sample description nTPM
Hippocampus
nTPM: 33.8
2529 Female, age 94, left hemisphere 37.6
1898 Male, age 80, left hemisphere 36.6
1855 Male, age 76, left hemisphere 34.6
2148 Female, age 91, left hemisphere 33.2
1911 Female, age 85, right hemisphere 32.8
2621 Female, age 67, right hemisphere 28.0
Dentate gyrus
nTPM: 32.5
2530 Female, age 94, left hemisphere 38.4
2010 Male, age 76, both hemispheres 37.3
1927 Female, age 91, both hemispheres 33.2
2528 Male, age 74, both hemispheres 30.5
2246 Female, age 85, both hemispheres 30.2
2531 Female, age 67, both hemispheres 25.3
Entorhinal gyrus
nTPM: 30.6
2117 Female, age 91, right hemisphere 44.3
2686 Male, age 75, right hemisphere 30.6
1938 Female, age 85, left hemisphere 30.3
2764 Male, age 80, right hemisphere 27.5
1787 Male, age 76, left hemisphere 25.9
2613 Female, age 94, left hemisphere 25.1
Hippocampus, CA1
nTPM: 32.4
1873 Female, age 85, both hemispheres 40.2
2527 Male, age 74, both hemispheres 37.6
2749 Male, age 80, left hemisphere 29.9
2082 Female, age 91, right hemisphere 27.8
2045 Male, age 76, both hemispheres 26.7
Hippocampus, CA2
nTPM: 30.6
1963 Male, age 80, left hemisphere 34.6
2113 Female, age 91, right hemisphere 31.2
2249 Male, age 74, both hemispheres 31.2
1940 Female, age 85, left hemisphere 30.1
2437 Female, age 94, left hemisphere 28.4
1892 Male, age 76, both hemispheres 27.9
Hippocampus, CA3
nTPM: 29.5
1891 Female, age 85, both hemispheres 37.9
2436 Male, age 74, both hemispheres 34.2
1867 Male, age 76, both hemispheres 29.1
2137 Male, age 80, left hemisphere 29.1
2861 Female, age 67, both hemispheres 24.6
2620 Female, age 94, left hemisphere 22.4
Parahippocampal cortex
nTPM: 31.8
2692 Male, age 74, both hemispheres 39.9
2250 Female, age 67, right hemisphere 35.2
1850 Male, age 80, both hemispheres 33.9
1990 Female, age 91, right hemisphere 33.3
2018 Male, age 76, both hemispheres 31.2
2245 Female, age 91, both hemispheres 31.0
1933 Female, age 85, both hemispheres 30.7
2693 Female, age 94, both hemispheres 28.6
2532 Female, age 72, left hemisphere 28.1
2622 Female, age 67, right hemisphere 26.4
Perirhinal gyrus
nTPM: 26.9
1841 Female, age 85, right hemisphere 30.7
1847 Female, age 91, left hemisphere 28.3
2848 Male, age 76, right hemisphere 26.1
2521 Female, age 94, right hemisphere 25.5
1794 Male, age 80, right hemisphere 24.2
Subiculum
nTPM: 36.4
2438 Female, age 94, left hemisphere 43.0
2729 Female, age 91, right hemisphere 38.6
2042 Male, age 76, both hemispheres 36.1
1901 Male, age 80, both hemispheres 34.5
2619 Male, age 74, both hemispheres 34.1
1977 Female, age 85, both hemispheres 31.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 90.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 90.2
Samples: 255

Max nTPM: 258.7
Min nTPM: 27.6
Std nTPM: 36.8
Median nTPM: 84.2
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 258.7
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 242.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 238.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 227.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 225.7
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 217.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 208.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 184.4
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 179.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 169.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 164.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 25.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.4
FF:10169-103B7 60 years, female 25.9
FF:10153-102I9 76 years, female 24.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 37.0
Pig sample Sample description nTPM
Subiculum
nTPM: 37.0
Samples: 4

Max nTPM: 46.6
Min nTPM: 32.2
Sample A Female 46.6
Sample B Female 35.5
Sample C Male 33.7
Sample D Male 32.2
Dorsal hippocampus
nTPM: 35.5
Samples: 4

Max nTPM: 45.2
Min nTPM: 29.8
Sample A Female 45.2
Sample B Female 31.9
Sample C Male 35.1
Sample D Male 29.8
Entorhinal cortex
nTPM: 34.5
Samples: 4

Max nTPM: 41.8
Min nTPM: 27.8
Sample A Female 32.3
Sample B Female 41.8
Sample C Male 35.9
Sample D Male 27.8
Ventral hippocampus
nTPM: 33.4
Samples: 4

Max nTPM: 38.5
Min nTPM: 26.8
Sample A Female 38.5
Sample B Female 34.4
Sample C Male 33.9
Sample D Male 26.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 65.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 61.6
Samples: 4

Max nTPM: 64.0
Min nTPM: 59.2
Sample A Male 61.9
Sample B Male 61.3
Sample C Female 64.0
Sample D Female 59.2
Hippocampal formation
nTPM: 65.1
Samples: 4

Max nTPM: 75.7
Min nTPM: 55.6
Sample A Male 75.7
Sample B Male 64.7
Sample C Female 55.6
Sample D Female 64.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69015500 Antisense, RP_050315_01_B03, Mouse strain C57BL/6J (56 days, male) 0.1

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