HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:105.7 nTPM
HPA Brain:92.2 nTPM
GTEx:105.7 nTPM
FANTOM5:247.6 Scaled Tags Per Million
Pig:195.7 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052474Antibody HPA052484Antibody HPA053767Antibody CAB037216
Glial cells Not detectedLowLowNot detected
Neuronal cells HighHighLowMedium









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 92.2
Sample id Sample description nTPM
Hippocampus
nTPM: 85.8
1898 Male, age 80, left hemisphere 109.2
1855 Male, age 76, left hemisphere 89.9
2529 Female, age 94, left hemisphere 82.3
2621 Female, age 67, right hemisphere 78.5
1911 Female, age 85, right hemisphere 78.2
2148 Female, age 91, left hemisphere 77.0
Dentate gyrus
nTPM: 82.5
2010 Male, age 76, both hemispheres 95.7
2530 Female, age 94, left hemisphere 93.6
1927 Female, age 91, both hemispheres 87.7
2528 Male, age 74, both hemispheres 80.2
2246 Female, age 85, both hemispheres 77.5
2531 Female, age 67, both hemispheres 60.3
Entorhinal gyrus
nTPM: 79.4
2117 Female, age 91, right hemisphere 91.9
2764 Male, age 80, right hemisphere 85.6
1787 Male, age 76, left hemisphere 82.3
1938 Female, age 85, left hemisphere 81.7
2686 Male, age 75, right hemisphere 70.0
2613 Female, age 94, left hemisphere 65.1
Hippocampus, CA1
nTPM: 89.4
2749 Male, age 80, left hemisphere 114.2
1873 Female, age 85, both hemispheres 93.8
2045 Male, age 76, both hemispheres 87.4
2527 Male, age 74, both hemispheres 84.1
2082 Female, age 91, right hemisphere 67.4
Hippocampus, CA2
nTPM: 84.6
1963 Male, age 80, left hemisphere 99.6
1892 Male, age 76, both hemispheres 98.2
2249 Male, age 74, both hemispheres 88.1
2437 Female, age 94, left hemisphere 81.7
2113 Female, age 91, right hemisphere 70.5
1940 Female, age 85, left hemisphere 69.8
Hippocampus, CA3
nTPM: 84.8
2436 Male, age 74, both hemispheres 101.3
1867 Male, age 76, both hemispheres 101.1
2137 Male, age 80, left hemisphere 88.9
1891 Female, age 85, both hemispheres 81.1
2620 Female, age 94, left hemisphere 71.9
2861 Female, age 67, both hemispheres 64.5
Parahippocampal cortex
nTPM: 84.9
1850 Male, age 80, both hemispheres 101.9
2532 Female, age 72, left hemisphere 88.7
2250 Female, age 67, right hemisphere 88.6
1990 Female, age 91, right hemisphere 88.5
2245 Female, age 91, both hemispheres 85.5
1933 Female, age 85, both hemispheres 84.3
2018 Male, age 76, both hemispheres 80.8
2692 Male, age 74, both hemispheres 80.8
2693 Female, age 94, both hemispheres 79.3
2622 Female, age 67, right hemisphere 70.6
Perirhinal gyrus
nTPM: 92.2
1841 Female, age 85, right hemisphere 99.4
1794 Male, age 80, right hemisphere 98.8
1847 Female, age 91, left hemisphere 92.8
2521 Female, age 94, right hemisphere 86.9
2848 Male, age 76, right hemisphere 83.3
Subiculum
nTPM: 83.5
2438 Female, age 94, left hemisphere 100.6
1901 Male, age 80, both hemispheres 89.0
1977 Female, age 85, both hemispheres 82.6
2619 Male, age 74, both hemispheres 76.6
2729 Female, age 91, right hemisphere 76.4
2042 Male, age 76, both hemispheres 75.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 105.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 105.7
Samples: 255

Max nTPM: 213.2
Min nTPM: 54.2
Std nTPM: 19.4
Median nTPM: 103.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 213.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 159.3
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 155.5
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 154.6
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 151.6
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 148.4
GTEX-11H98-0011-R1a-SM-GIN8O 50-59 years, male 147.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 147.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 146.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 144.2
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 141.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 247.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 247.6
FF:10153-102I9 76 years, female 258.5
FF:10169-103B7 60 years, female 236.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 195.7
Pig sample Sample description nTPM
Subiculum
nTPM: 170.2
Samples: 4

Max nTPM: 208.0
Min nTPM: 149.4
Sample A Female 208.0
Sample B Female 165.8
Sample C Male 157.7
Sample D Male 149.4
Dorsal hippocampus
nTPM: 195.7
Samples: 4

Max nTPM: 253.0
Min nTPM: 147.2
Sample A Female 253.0
Sample B Female 182.1
Sample C Male 200.6
Sample D Male 147.2
Entorhinal cortex
nTPM: 173.1
Samples: 4

Max nTPM: 193.7
Min nTPM: 152.6
Sample A Female 172.3
Sample B Female 193.7
Sample C Male 173.7
Sample D Male 152.6
Ventral hippocampus
nTPM: 176.6
Samples: 4

Max nTPM: 202.5
Min nTPM: 136.8
Sample A Female 198.1
Sample B Female 136.8
Sample C Male 202.5
Sample D Male 169.1

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