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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:437.7 nTPM
HPA Brain:706.9 nTPM
GTEx:437.7 nTPM
Pig:428.5 nTPM
Mouse:957.4 nTPM
Allen mouse:18.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

706.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 680.8
2226 Male, age 75, left hemisphere 858.8
1961 Female, age 42, unknown 502.8
Dorsomedial nucleus
nTPM: 582.1
1989 Male, age 62, unknown 721.8
2017 Female, age 42, unknown 531.2
2041 Female, age 72, unknown 493.5
Lateral hypothalamic area
nTPM: 701.1
2228 Male, age 66, unknown 931.1
2271 Male, age 75, both hemispheres 750.1
1791 Male, age 80, right hemisphere 605.6
2412 Male, age 62, unknown 517.7
Mammillary body
nTPM: 706.9
1923 Female, age 72, unknown 887.6
1834 Female, age 42, unknown 704.5
2413 Male, age 66, unknown 678.2
1948 Female, age 72, unknown 663.0
1945 Male, age 80, right hemisphere 601.2
Paraventricular nucleus
nTPM: 664.3
2700 Male, age 62, unknown 664.3
Preoptic area
nTPM: 615.3
1907 Male, age 80, right hemisphere 641.4
2414 Female, age 72, unknown 624.3
1861 Female, age 42, unknown 580.1
Supraoptic nucleus
nTPM: 600.7
1894 Female, age 72, unknown 633.5
2043 Male, age 62, unknown 598.4
2835 Female, age 72, unknown 570.1
Ventromedial nucleus
nTPM: 572.5
1982 Female, age 72, unknown 649.0
1822 Female, age 42, unknown 495.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

437.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 437.7
Samples: 257

Max nTPM: 940.4
Min nTPM: 218.2
Std nTPM: 104.5
Median nTPM: 433.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 940.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 814.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 800.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 790.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 675.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 654.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 646.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 639.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 638.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 638.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 629.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 625.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 612.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 591.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 590.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 590.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 586.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 577.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 571.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 570.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 570.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 568.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 568.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 563.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 561.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 560.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 558.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 557.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 557.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 554.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 552.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 547.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 544.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 543.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 542.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 541.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 540.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 540.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 539.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 533.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 531.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 528.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 527.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 527.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 525.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 522.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 522.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 519.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 519.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 518.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 517.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 517.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 513.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 512.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 509.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 508.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 508.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 507.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 506.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 505.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 504.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 502.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 501.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 501.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 498.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 498.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 498.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 497.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 495.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 494.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 493.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 489.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 488.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 488.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 487.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 487.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 486.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 482.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 482.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 479.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 479.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 478.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 478.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 477.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 477.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 474.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 474.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 473.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 471.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 467.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 466.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 466.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 465.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 464.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 464.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 462.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 462.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 462.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 461.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 461.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 458.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 456.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 455.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 453.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 453.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 452.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 451.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 451.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 450.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 448.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 448.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 447.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 446.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 445.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 445.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 444.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 444.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 442.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 442.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 442.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 440.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 439.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 439.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 437.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 436.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 435.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 435.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 434.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 433.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 432.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 431.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 427.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 427.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 425.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 425.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 424.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 424.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 423.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 422.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 422.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 421.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 421.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 420.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 419.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 417.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 415.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 414.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 412.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 411.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 411.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 410.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 409.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 406.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 405.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 405.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 399.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 399.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 397.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 396.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 394.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 393.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 393.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 393.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 391.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 391.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 390.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 390.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 389.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 388.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 388.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 387.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 387.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 386.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 386.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 383.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 382.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 381.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 381.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 381.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 380.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 378.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 376.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 376.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 375.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 373.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 372.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 370.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 369.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 368.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 366.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 365.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 365.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 362.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 362.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 362.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 361.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 361.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 360.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 359.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 357.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 357.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 357.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 356.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 355.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 355.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 352.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 351.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 351.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 350.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 350.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 349.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 348.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 346.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 344.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 344.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 342.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 341.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 340.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 340.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 337.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 336.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 335.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 335.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 334.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 331.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 329.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 329.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 326.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 326.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 323.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 323.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 323.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 317.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 317.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 317.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 314.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 303.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 302.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 301.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 297.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 297.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 296.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 291.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 289.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 278.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 270.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 267.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 263.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 263.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 256.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 253.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 242.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 227.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 226.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 225.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 220.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 218.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

428.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 428.5
Samples: 4

Max nTPM: 526.5
Min nTPM: 335.3
Sample A Female 526.5
Sample B Female 421.6
Sample C Male 430.7
Sample D Male 335.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

957.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 957.4
Samples: 4

Max nTPM: 1001.7
Min nTPM: 911.5
Sample A Male 954.3
Sample B Male 1001.7
Sample C Female 962.1
Sample D Female 911.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 18.9
79591705 Antisense, RP_071218_02_B09, Mouse strain C57BL/6J (56 days, male) 32.5
106 Antisense, RP_Baylor_253875, Mouse strain C57BL/6J (56 days, male) 24.2
107 Antisense, RP_Baylor_253875, Mouse strain C57BL/6J (56 days, male) 20.8
70611467 Antisense, RP_050630_03_C12, Mouse strain C57BL/6J (56 days, male) 0.0

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