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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • RPL13A
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN72 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM9 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE14 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS
MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:394.6 nTPM
GTEx:978.7 nTPM
FANTOM5:117.6 Scaled Tags Per Million
Macaque:123.4 nTPM
Pig:7.3 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

394.6
Sample id Sample description nTPM
Putamen
nTPM: 394.6
2466 Female, age 79, unknown 463.1
2647 Male, age 75, left hemisphere 416.7
2489 Female, age 72, unknown 404.9
2482 Female, age 94, left hemisphere 393.7
1838 Male, age 80, right hemisphere 380.6
1937 Female, age 91, right hemisphere 371.1
1829 Male, age 74, unknown 331.8

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

978.7
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 978.7
Samples: 254

Max nTPM: 2042.2
Min nTPM: 359.9
Std nTPM: 255.6
Median nTPM: 936.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 2042.2
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 1979.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1860.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1739.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1707.6
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 1689.0
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 1661.2
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 1648.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1534.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1512.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1491.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1488.0
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 1464.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1455.1
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 1446.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1418.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1404.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1376.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1371.0
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 1365.8
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 1359.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1344.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1340.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1338.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1333.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1320.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1319.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1297.2
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 1258.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1257.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1257.2
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 1240.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1238.4
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 1219.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1219.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1218.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1212.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1206.8
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 1203.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 1184.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1182.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1178.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1176.6
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 1176.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 1173.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1172.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1166.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 1161.7
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 1160.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1160.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1158.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1157.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1148.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1135.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1122.0
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 1114.6
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 1113.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1105.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1104.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1103.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1102.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1100.1
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 1097.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1090.0
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 1089.7
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 1089.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1085.3
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 1081.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1081.7
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 1073.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1070.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 1068.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1066.2
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 1065.9
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 1065.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1061.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1058.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 1056.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 1054.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1052.3
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 1051.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1047.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 1045.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1042.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 1042.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1040.1
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 1039.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1035.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1032.9
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 1032.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 1020.8
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 1020.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 1016.7
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 1016.2
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 1013.9
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 1011.2
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 1010.2
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 1007.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1004.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 1003.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 1001.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 1000.3
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 999.4
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 995.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 993.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 988.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 983.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 982.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 980.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 979.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 976.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 975.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 973.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 970.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 970.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 968.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 967.2
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 965.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 961.4
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 961.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 949.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 949.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 948.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 946.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 944.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 943.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 936.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 935.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 935.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 931.2
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 930.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 928.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 926.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 925.6
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 924.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 922.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 915.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 914.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 909.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 909.1
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 907.7
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 906.2
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 905.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 902.7
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 896.5
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 894.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 887.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 887.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 883.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 881.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 881.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 878.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 877.7
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 877.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 876.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 873.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 869.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 868.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 868.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 867.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 864.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 863.6
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 863.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 861.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 858.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 857.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 854.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 854.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 852.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 851.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 850.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 848.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 847.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 846.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 844.8
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 844.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 842.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 842.8
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 841.6
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 838.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 836.0
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 834.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 833.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 833.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 831.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 829.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 829.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 826.1
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 820.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 819.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 816.9
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 815.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 812.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 811.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 809.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 799.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 797.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 795.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 795.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 794.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 792.9
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 785.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 784.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 784.5
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 775.6
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 774.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 770.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 770.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 769.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 769.7
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 768.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 765.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 765.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 765.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 762.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 761.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 746.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 745.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 742.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 734.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 725.6
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 721.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 712.3
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 708.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 704.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 703.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 696.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 692.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 690.0
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 685.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 684.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 680.4
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 677.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 676.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 675.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 665.0
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 663.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 663.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 662.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 660.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 651.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 648.5
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 647.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 645.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 640.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 633.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 611.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 605.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 592.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 590.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 546.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 534.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 477.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 359.9
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

117.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 117.6
FF:10176-103C5 60 years, female 117.6

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

123.4
Macaque sample Sample description nTPM
Putamen
nTPM: 123.5
Samples: 2

Max nTPM: 158.9
Min nTPM: 88.0
Sample A 158.9
Sample B 88.0

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7.3
Pig sample Sample description nTPM
Putamen
nTPM: 7.3
Samples: 3

Max nTPM: 9.6
Min nTPM: 5.5
Sample B Female 5.5
Sample C Male 9.6
Sample D Male 6.9

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