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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • RPS8
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:323.9 nTPM
GTEx:809.7 nTPM
FANTOM5:16.5 Scaled Tags Per Million
Macaque:151.0 nTPM
Pig:261.5 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

323.9
Sample id Sample description nTPM
Putamen
nTPM: 323.9
2466 Female, age 79, unknown 382.4
1937 Female, age 91, right hemisphere 353.7
2482 Female, age 94, left hemisphere 331.8
1829 Male, age 74, unknown 320.6
1838 Male, age 80, right hemisphere 319.7
2647 Male, age 75, left hemisphere 296.6
2489 Female, age 72, unknown 262.6

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

809.7
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 809.7
Samples: 254

Max nTPM: 2111.8
Min nTPM: 446.3
Std nTPM: 231.7
Median nTPM: 763.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 2111.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1744.6
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 1561.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1456.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1448.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1413.2
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 1382.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1377.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1341.9
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 1283.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1279.4
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 1277.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 1252.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1185.6
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 1176.3
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 1171.9
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 1160.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1152.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1142.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1138.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1138.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1136.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1135.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1127.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1124.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1116.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1114.8
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 1103.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1090.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1059.3
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 1055.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1054.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1050.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1042.7
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 1040.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1039.8
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 1026.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1025.4
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 1017.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1010.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1009.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1008.4
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 1004.2
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 998.4
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 991.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 988.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 986.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 984.0
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 982.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 968.1
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 967.0
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 960.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 960.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 953.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 952.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 951.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 946.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 946.1
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 945.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 944.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 944.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 942.6
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 941.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 935.6
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 934.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 932.6
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 926.9
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 923.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 905.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 897.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 895.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 895.1
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 894.2
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 886.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 886.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 876.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 874.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 869.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 867.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 863.8
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 862.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 855.3
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 854.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 852.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 852.0
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 851.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 850.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 847.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 845.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 838.8
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 834.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 833.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 821.3
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 817.0
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 816.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 816.5
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 815.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 815.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 815.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 811.1
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 805.9
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 803.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 803.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 799.4
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 796.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 794.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 791.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 790.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 790.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 789.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 787.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 785.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 785.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 785.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 783.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 781.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 780.3
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 779.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 777.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 776.5
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 772.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 772.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 772.3
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 768.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 767.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 765.3
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 765.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 762.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 761.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 759.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 758.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 757.4
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 749.9
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 744.0
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 743.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 742.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 740.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 739.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 739.3
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 738.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 736.9
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 736.3
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 736.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 735.7
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 734.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 733.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 732.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 731.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 729.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 727.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 727.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 726.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 725.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 725.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 723.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 721.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 717.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 717.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 716.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 712.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 709.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 709.5
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 708.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 708.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 707.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 707.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 705.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 702.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 702.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 702.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 702.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 700.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 700.3
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 698.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 696.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 693.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 692.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 690.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 685.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 678.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 678.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 676.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 676.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 671.0
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 670.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 668.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 666.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 666.7
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 665.5
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 662.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 657.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 655.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 653.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 652.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 649.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 649.1
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 649.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 648.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 642.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 638.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 637.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 633.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 629.5
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 627.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 623.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 622.4
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 619.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 617.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 613.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 612.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 612.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 610.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 608.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 607.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 605.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 600.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 599.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 598.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 583.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 576.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 576.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 576.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 575.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 574.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 573.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 569.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 563.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 556.7
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 556.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 555.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 555.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 549.1
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 546.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 545.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 543.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 543.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 542.4
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 542.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 541.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 540.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 538.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 532.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 521.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 520.4
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 506.8
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 484.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 483.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 475.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 466.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 459.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 459.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 458.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 453.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 446.3
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

16.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 16.5
FF:10176-103C5 60 years, female 16.5

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

151.0
Macaque sample Sample description nTPM
Putamen
nTPM: 151.0
Samples: 2

Max nTPM: 162.5
Min nTPM: 139.4
Sample A 139.4
Sample B 162.5

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

261.5
Pig sample Sample description nTPM
Putamen
nTPM: 261.5
Samples: 3

Max nTPM: 328.7
Min nTPM: 206.3
Sample B Female 206.3
Sample C Male 328.7
Sample D Male 249.5

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