We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
MGST3
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • MGST3
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:215.7 nTPM
HPA Brain:237.3 nTPM
GTEx:215.7 nTPM
Pig:114.9 nTPM
Mouse:72.0 nTPM
Allen mouse:2.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

237.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 142.9
2226 Male, age 75, left hemisphere 177.3
1961 Female, age 42, unknown 108.5
Dorsomedial nucleus
nTPM: 131.1
1989 Male, age 62, unknown 158.5
2041 Female, age 72, unknown 125.0
2017 Female, age 42, unknown 109.9
Lateral hypothalamic area
nTPM: 177.4
1791 Male, age 80, right hemisphere 199.9
2228 Male, age 66, unknown 193.6
2271 Male, age 75, both hemispheres 185.9
2412 Male, age 62, unknown 130.3
Mammillary body
nTPM: 237.3
1923 Female, age 72, unknown 374.0
1948 Female, age 72, unknown 210.8
2413 Male, age 66, unknown 210.2
1834 Female, age 42, unknown 204.8
1945 Male, age 80, right hemisphere 186.9
Paraventricular nucleus
nTPM: 123.8
2700 Male, age 62, unknown 123.8
Preoptic area
nTPM: 141.5
1907 Male, age 80, right hemisphere 165.6
2414 Female, age 72, unknown 130.0
1861 Female, age 42, unknown 128.9
Supraoptic nucleus
nTPM: 160.4
1894 Female, age 72, unknown 194.0
2043 Male, age 62, unknown 164.8
2835 Female, age 72, unknown 122.4
Ventromedial nucleus
nTPM: 112.2
1982 Female, age 72, unknown 120.1
1822 Female, age 42, unknown 104.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

215.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 215.7
Samples: 257

Max nTPM: 445.8
Min nTPM: 54.6
Std nTPM: 67.6
Median nTPM: 206.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 445.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 439.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 436.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 430.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 423.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 397.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 394.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 391.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 385.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 379.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 376.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 356.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 356.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 346.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 344.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 340.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 334.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 319.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 315.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 314.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 313.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 306.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 303.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 302.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 299.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 298.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 298.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 290.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 288.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 283.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 282.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 278.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 278.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 277.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 276.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 276.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 274.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 274.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 273.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 270.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 268.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 268.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 268.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 267.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 266.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 265.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 263.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 259.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 259.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 258.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 258.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 258.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 256.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 255.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 255.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 254.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 253.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 253.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 253.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 253.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 252.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 252.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 252.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 252.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 251.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 251.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 251.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 251.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 249.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 249.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 249.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 248.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 247.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 247.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 244.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 242.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 242.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 241.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 238.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 238.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 238.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 236.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 236.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 235.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 235.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 234.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 230.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 229.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 229.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 229.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 229.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 228.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 228.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 228.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 227.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 227.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 226.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 225.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 223.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 223.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 222.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 221.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 221.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 220.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 220.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 220.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 220.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 219.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 218.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 217.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 217.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 216.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 216.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 214.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 213.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 213.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 212.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 212.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 212.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 211.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 211.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 209.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 208.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 208.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 208.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 207.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 206.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 206.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 206.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 206.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 206.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 206.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 205.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 205.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 204.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 203.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 203.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 203.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 200.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 200.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 199.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 199.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 198.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 197.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 197.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 195.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 195.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 195.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 195.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 195.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 195.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 194.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 194.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 193.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 193.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 193.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 193.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 191.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 191.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 190.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 190.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 190.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 189.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 188.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 188.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 187.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 187.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 187.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 186.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 186.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 185.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 185.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 185.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 185.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 183.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 183.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 183.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 182.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 181.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 181.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 181.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 180.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 179.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 179.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 179.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 178.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 176.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 176.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 175.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 174.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 174.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 173.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 172.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 169.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 169.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 169.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 168.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 167.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 166.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 165.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 164.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 163.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 163.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 162.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 162.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 162.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 162.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 162.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 161.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 161.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 158.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 157.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 157.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 156.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 156.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 156.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 156.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 153.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 152.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 152.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 150.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 149.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 147.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 147.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 146.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 146.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 145.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 145.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 144.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 144.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 142.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 141.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 141.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 139.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 139.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 137.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 137.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 136.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 135.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 135.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 134.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 133.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 133.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 132.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 118.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 116.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 115.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 111.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 107.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 106.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 100.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 98.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 96.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 90.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 83.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 55.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 54.6
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

114.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 114.9
Samples: 4

Max nTPM: 152.6
Min nTPM: 75.6
Sample A Female 152.6
Sample B Female 128.5
Sample C Male 103.0
Sample D Male 75.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 72.0
Samples: 4

Max nTPM: 76.3
Min nTPM: 66.3
Sample A Male 66.3
Sample B Male 71.7
Sample C Female 73.5
Sample D Female 76.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.7
71015350 Antisense, RP_050725_02_G06, Mouse strain C57BL/6J (56 days, male) 3.1
68441640 Antisense, RP_041214_02_G04, Mouse strain C57BL/6J (56 days, male) 2.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo