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  • TISSUE

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  • MCL1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:44.7 nTPM
HPA Brain:87.6 nTPM
GTEx:44.7 nTPM
Pig:55.7 nTPM
Mouse:39.7 nTPM
Allen mouse:0.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

87.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 60.2
1961 Female, age 42, unknown 66.3
2226 Male, age 75, left hemisphere 54.1
Dorsomedial nucleus
nTPM: 61.5
1989 Male, age 62, unknown 73.9
2017 Female, age 42, unknown 57.7
2041 Female, age 72, unknown 52.9
Lateral hypothalamic area
nTPM: 64.6
1791 Male, age 80, right hemisphere 78.1
2271 Male, age 75, both hemispheres 61.6
2228 Male, age 66, unknown 60.3
2412 Male, age 62, unknown 58.3
Mammillary body
nTPM: 68.6
2413 Male, age 66, unknown 77.6
1834 Female, age 42, unknown 69.5
1945 Male, age 80, right hemisphere 69.1
1923 Female, age 72, unknown 68.9
1948 Female, age 72, unknown 57.8
Paraventricular nucleus
nTPM: 55.0
2700 Male, age 62, unknown 55.0
Preoptic area
nTPM: 54.1
1861 Female, age 42, unknown 60.4
1907 Male, age 80, right hemisphere 54.4
2414 Female, age 72, unknown 47.5
Supraoptic nucleus
nTPM: 87.6
1894 Female, age 72, unknown 92.6
2043 Male, age 62, unknown 91.9
2835 Female, age 72, unknown 78.3
Ventromedial nucleus
nTPM: 50.4
1822 Female, age 42, unknown 54.4
1982 Female, age 72, unknown 46.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 44.7
Samples: 257

Max nTPM: 143.6
Min nTPM: 16.8
Std nTPM: 22.6
Median nTPM: 38.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 143.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 132.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 130.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 129.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 124.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 120.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 118.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 108.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 90.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 89.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 88.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 86.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 84.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 82.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 81.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 80.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 77.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 76.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 76.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 75.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 75.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 74.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 74.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 73.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 73.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 73.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 73.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 73.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 72.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 71.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 71.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 71.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 71.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 71.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 69.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 68.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 67.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 67.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 66.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 66.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 66.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 65.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 65.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 64.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 64.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 64.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 64.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 62.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 61.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 60.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 59.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 59.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 59.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 59.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 59.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 59.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 58.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 58.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 57.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 57.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 57.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 57.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 57.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 57.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 56.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 55.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 55.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 54.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 54.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 53.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 52.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 52.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 52.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 52.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 52.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 51.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 51.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 51.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 50.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 50.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 50.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 49.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 49.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 49.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 49.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 48.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 48.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 48.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 47.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 47.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 47.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 46.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 46.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 46.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 45.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 45.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 45.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 45.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 45.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 45.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 45.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 44.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 44.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 44.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 44.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 44.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 43.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 43.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 42.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 42.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 41.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 41.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 41.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 40.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 40.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 40.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 40.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 40.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 39.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 39.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 39.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 39.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 39.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 39.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 38.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 38.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 38.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 38.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 38.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 38.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 38.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 38.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 37.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 37.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 36.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 36.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 36.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 36.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 36.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 36.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 36.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 36.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 36.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 35.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 35.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 35.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 35.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 35.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 35.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 35.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 35.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 34.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 34.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 34.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 34.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 34.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 33.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 33.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 33.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 33.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 33.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 33.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 33.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 33.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 33.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 33.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 32.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 32.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 32.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 32.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 32.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 32.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 31.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 31.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 31.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 31.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 31.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 31.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 31.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 31.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 31.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 30.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 30.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 30.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 30.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 29.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 29.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 29.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 29.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 29.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 28.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 28.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 28.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 28.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 28.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 28.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 28.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 28.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 28.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 27.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 27.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 26.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 26.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 26.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 26.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 26.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 25.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 25.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 25.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 25.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 25.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 25.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 25.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 25.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 25.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 25.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 25.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 25.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 24.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 24.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 24.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 24.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 24.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 23.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 23.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 23.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 23.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 23.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 22.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 22.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 22.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 22.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 22.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 22.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 21.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 21.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 21.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 21.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 20.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 20.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 20.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 20.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 20.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 19.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 19.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 19.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 18.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 18.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 18.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 18.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 18.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 18.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 18.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 18.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 18.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 17.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 16.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 55.7
Samples: 4

Max nTPM: 63.6
Min nTPM: 46.3
Sample A Female 63.6
Sample B Female 51.3
Sample C Male 61.4
Sample D Male 46.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

39.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 39.7
Samples: 4

Max nTPM: 41.2
Min nTPM: 37.6
Sample A Male 37.6
Sample B Male 41.2
Sample C Female 39.3
Sample D Female 40.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.9
112647104 Antisense, RP_110421_01_A10, Mouse strain C57BL/6J (56 days, male) 1.7
68203510 Antisense, RP_041208_01_E06, Mouse strain C57BL/6J (56 days, male) 0.1

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