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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Glial cells:
Low
Neuronal cells:
Low
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
70.7
nTPM
HPA Brain:
22.0
nTPM
GTEx:
70.7
nTPM
FANTOM5:
115.4
Scaled Tags Per Million
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA036455
Glial cells
Low
Neuronal cells
Low
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM
22.0
Sample id
Sample description
nTPM
Hippocampus nTPM: 21.6
1898
Male, age 80, left hemisphere
27.0
2529
Female, age 94, left hemisphere
23.5
1911
Female, age 85, right hemisphere
20.4
2148
Female, age 91, left hemisphere
20.4
2621
Female, age 67, right hemisphere
19.5
1855
Male, age 76, left hemisphere
18.6
Dentate gyrus nTPM: 20.4
2530
Female, age 94, left hemisphere
23.8
2010
Male, age 76, both hemispheres
23.6
2528
Male, age 74, both hemispheres
19.9
1927
Female, age 91, both hemispheres
19.0
2246
Female, age 85, both hemispheres
18.9
2531
Female, age 67, both hemispheres
17.0
Entorhinal gyrus nTPM: 19.6
2117
Female, age 91, right hemisphere
26.0
1938
Female, age 85, left hemisphere
21.3
2764
Male, age 80, right hemisphere
20.9
1787
Male, age 76, left hemisphere
19.7
2686
Male, age 75, right hemisphere
16.1
2613
Female, age 94, left hemisphere
13.8
Hippocampus, CA1 nTPM: 22.0
2749
Male, age 80, left hemisphere
29.6
2527
Male, age 74, both hemispheres
23.4
1873
Female, age 85, both hemispheres
22.0
2082
Female, age 91, right hemisphere
17.8
2045
Male, age 76, both hemispheres
17.1
Hippocampus, CA2 nTPM: 21.3
1963
Male, age 80, left hemisphere
24.2
2249
Male, age 74, both hemispheres
23.8
1892
Male, age 76, both hemispheres
22.2
2437
Female, age 94, left hemisphere
20.1
1940
Female, age 85, left hemisphere
19.0
2113
Female, age 91, right hemisphere
18.3
Hippocampus, CA3 nTPM: 20.3
2137
Male, age 80, left hemisphere
23.8
1867
Male, age 76, both hemispheres
23.0
1891
Female, age 85, both hemispheres
22.0
2436
Male, age 74, both hemispheres
20.8
2620
Female, age 94, left hemisphere
16.8
2861
Female, age 67, both hemispheres
15.3
Parahippocampal cortex nTPM: 18.7
1990
Female, age 91, right hemisphere
21.5
1850
Male, age 80, both hemispheres
21.0
1933
Female, age 85, both hemispheres
20.4
2018
Male, age 76, both hemispheres
20.4
2245
Female, age 91, both hemispheres
20.1
2250
Female, age 67, right hemisphere
19.4
2532
Female, age 72, left hemisphere
17.7
2692
Male, age 74, both hemispheres
16.6
2693
Female, age 94, both hemispheres
15.2
2622
Female, age 67, right hemisphere
14.4
Perirhinal gyrus nTPM: 20.5
1794
Male, age 80, right hemisphere
22.4
1841
Female, age 85, right hemisphere
21.6
1847
Female, age 91, left hemisphere
21.3
2521
Female, age 94, right hemisphere
18.6
2848
Male, age 76, right hemisphere
18.6
Subiculum nTPM: 21.8
1977
Female, age 85, both hemispheres
24.0
1901
Male, age 80, both hemispheres
23.8
2042
Male, age 76, both hemispheres
22.2
2438
Female, age 94, left hemisphere
21.5
2729
Female, age 91, right hemisphere
19.5
2619
Male, age 74, both hemispheres
19.4
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
70.7
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 70.7
Samples: 197
Max nTPM: 140.8
Min nTPM: 31.7
Std nTPM: 14.4
Median nTPM: 69.7
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
140.8
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
137.6
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
107.7
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
106.4
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
103.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
103.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
99.7
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
99.0
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
98.3
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
96.7
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
92.9
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
92.3
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
89.6
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
87.9
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
87.1
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
86.9
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
86.8
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
86.7
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
86.7
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
86.0
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
85.7
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
85.4
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
85.3
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
85.3
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
85.2
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
84.8
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
84.6
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
84.4
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
84.3
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
83.2
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
83.1
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
82.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
82.3
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
82.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
81.8
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
81.7
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
81.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
81.7
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
81.6
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
81.3
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
80.4
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
80.2
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
79.8
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
79.7
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
79.5
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
79.3
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
78.9
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
78.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
78.1
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
77.2
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
77.0
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
76.9
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
76.9
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
76.9
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
76.7
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
76.7
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
76.5
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
76.4
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
76.3
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
76.0
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
75.9
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
75.7
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
75.7
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
75.7
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
75.5
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
75.4
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
75.2
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
74.9
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
74.9
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
74.8
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
74.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
74.0
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
73.8
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
73.3
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
73.0
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
72.8
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
72.8
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
72.8
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
72.4
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
72.1
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
71.9
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
71.9
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
71.8
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
71.2
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
71.2
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
71.2
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
71.1
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
71.1
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
71.0
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
71.0
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
70.8
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
70.6
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
70.3
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
70.3
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
70.2
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
69.9
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
69.8
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
69.7
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
69.7
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
69.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
69.7
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
69.6
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
69.4
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
69.2
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
69.0
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
69.0
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
68.4
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
68.4
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
68.1
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
67.7
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
67.7
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
67.6
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
67.5
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
67.3
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
67.1
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
66.7
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
66.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
66.0
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
65.8
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
65.2
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
65.2
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
65.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
65.1
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
64.8
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
64.8
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
64.6
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
64.4
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
64.2
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
64.2
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
63.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
63.7
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
63.6
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
63.6
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
63.6
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
63.5
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
63.3
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
63.2
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
63.0
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
62.9
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
62.8
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
62.7
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
62.7
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
62.6
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
62.6
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
62.5
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
62.2
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
61.9
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
61.9
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
61.8
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
61.5
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
61.0
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
60.6
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
60.6
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
60.0
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
60.0
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
59.9
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
59.6
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
59.5
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
59.4
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
59.2
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
59.0
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
58.9
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
58.6
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
58.3
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
58.3
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
58.3
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
57.9
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
57.8
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
57.6
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
57.4
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
56.6
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
56.5
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
56.5
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
56.0
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
56.0
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
55.8
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
55.7
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
55.5
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
55.4
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
55.1
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
55.0
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
54.4
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
54.0
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
53.8
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
53.4
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
53.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
52.9
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
51.5
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
48.9
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
48.2
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
47.9
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
47.6
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
47.3
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
43.1
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
40.0
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
38.0
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
31.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.