A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1.2
nTPM
Monaco:
35.7
nTPM
Schmiedel:
93.5
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
1.2
HPA sample
nTPM
Classical monocyte nTPM: 0.7
Samples: 6
Max nTPM: 0.9
Min nTPM: 0.4
P10809_1003
0.7
P10809_1020
0.9
P10809_1039
0.6
P10809_1058
0.6
P10809_1080
0.7
P10809_1107
0.4
Intermediate monocyte nTPM: 1.2
Samples: 6
Max nTPM: 3.2
Min nTPM: 0.0
P10809_1004
1.1
P10809_1023
0.0
P10809_1042
0.3
P10809_1061
3.2
P10809_1081
1.3
P10809_1108
1.3
Non-classical monocyte nTPM: 1.2
Samples: 5
Max nTPM: 2.3
Min nTPM: 0.0
P10809_1005
2.3
P10809_1053
1.5
P10809_1072
0.0
P10809_1082
1.7
P10809_1109
0.6
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
35.7
Monaco sample
nTPM
Classical monocyte nTPM: 21.0
Samples: 4
Max nTPM: 24.0
Min nTPM: 15.8
RHH5313_R3680
22.1
RHH5221_R3593
15.8
RHH5250_R3622
24.0
RHH5279_R3651
22.2
Intermediate monocyte nTPM: 34.1
Samples: 4
Max nTPM: 61.2
Min nTPM: 18.1
RHH5314_R3681
19.1
RHH5222_R3594
38.1
RHH5251_R3623
61.2
RHH5280_R3652
18.1
Non-classical monocyte nTPM: 35.7
Samples: 4
Max nTPM: 44.1
Min nTPM: 24.2
RHH5315_R3682
41.9
RHH5223_R3595
32.8
RHH5252_R3624
44.1
RHH5281_R3653
24.2
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
93.5
Schmiedel sample id
TPM
Classical monocyte TPM: 40.0
Samples: 91
Max TPM: 49.3
Min TPM: 26.9
MONOCYTES_1
49.3
MONOCYTES_2
49.3
MONOCYTES_3
49.2
MONOCYTES_4
49.2
MONOCYTES_5
48.3
MONOCYTES_6
48.1
MONOCYTES_7
48.0
MONOCYTES_8
48.0
MONOCYTES_9
47.5
MONOCYTES_10
46.5
MONOCYTES_11
46.1
MONOCYTES_12
45.8
MONOCYTES_13
45.7
MONOCYTES_14
45.7
MONOCYTES_15
45.6
MONOCYTES_16
45.3
MONOCYTES_17
45.0
MONOCYTES_18
44.8
MONOCYTES_19
43.9
MONOCYTES_20
43.6
MONOCYTES_21
43.2
MONOCYTES_22
43.1
MONOCYTES_23
43.0
MONOCYTES_24
42.9
MONOCYTES_25
42.8
MONOCYTES_26
42.7
MONOCYTES_27
42.6
MONOCYTES_28
42.6
MONOCYTES_29
42.3
MONOCYTES_30
42.2
MONOCYTES_31
42.1
MONOCYTES_32
41.7
MONOCYTES_33
41.5
MONOCYTES_34
41.2
MONOCYTES_35
41.1
MONOCYTES_36
41.1
MONOCYTES_37
41.0
MONOCYTES_38
41.0
MONOCYTES_39
40.7
MONOCYTES_40
40.6
MONOCYTES_41
40.4
MONOCYTES_42
40.4
MONOCYTES_43
40.2
MONOCYTES_44
40.0
MONOCYTES_45
39.9
MONOCYTES_46
39.7
MONOCYTES_47
39.6
MONOCYTES_48
39.6
MONOCYTES_49
39.6
MONOCYTES_50
39.6
MONOCYTES_51
39.4
MONOCYTES_52
39.2
MONOCYTES_53
38.9
MONOCYTES_54
38.7
MONOCYTES_55
38.5
MONOCYTES_56
38.4
MONOCYTES_57
38.4
MONOCYTES_58
38.3
MONOCYTES_59
38.3
MONOCYTES_60
38.2
MONOCYTES_61
38.2
MONOCYTES_62
38.1
MONOCYTES_63
38.1
MONOCYTES_64
38.1
MONOCYTES_65
37.5
MONOCYTES_66
37.3
MONOCYTES_67
36.8
MONOCYTES_68
36.8
MONOCYTES_69
36.7
MONOCYTES_70
36.5
MONOCYTES_71
36.5
MONOCYTES_72
36.2
MONOCYTES_73
35.8
MONOCYTES_74
35.4
MONOCYTES_75
35.4
MONOCYTES_76
35.3
MONOCYTES_77
34.9
MONOCYTES_78
34.9
MONOCYTES_79
34.8
MONOCYTES_80
34.6
MONOCYTES_81
34.3
MONOCYTES_82
33.9
MONOCYTES_83
33.5
MONOCYTES_84
33.5
MONOCYTES_85
33.4
MONOCYTES_86
32.8
MONOCYTES_87
31.6
MONOCYTES_88
31.2
MONOCYTES_89
30.4
MONOCYTES_90
30.3
MONOCYTES_91
26.9
Show allShow less
Non-classical monocyte TPM: 93.5
Samples: 90
Max TPM: 146.5
Min TPM: 63.7
M2_1
146.5
M2_2
130.4
M2_3
126.0
M2_4
125.0
M2_5
123.8
M2_6
123.5
M2_7
121.5
M2_8
120.6
M2_9
116.0
M2_10
112.4
M2_11
110.4
M2_12
110.4
M2_13
110.3
M2_14
109.9
M2_15
109.7
M2_16
109.1
M2_17
108.6
M2_18
108.1
M2_19
107.3
M2_20
107.0
M2_21
106.1
M2_22
105.7
M2_23
103.8
M2_24
103.4
M2_25
102.6
M2_26
102.1
M2_27
102.0
M2_28
101.9
M2_29
100.8
M2_30
100.8
M2_31
100.3
M2_32
99.2
M2_33
99.2
M2_34
98.8
M2_35
97.6
M2_36
95.6
M2_37
95.0
M2_38
95.0
M2_39
94.3
M2_40
94.2
M2_41
93.2
M2_42
91.7
M2_43
91.5
M2_44
90.7
M2_45
90.3
M2_46
89.9
M2_47
89.6
M2_48
89.4
M2_49
89.3
M2_50
88.8
M2_51
88.8
M2_52
88.2
M2_53
88.1
M2_54
87.3
M2_55
86.3
M2_56
85.3
M2_57
85.1
M2_58
84.4
M2_59
84.2
M2_60
83.9
M2_61
83.7
M2_62
83.4
M2_63
83.2
M2_64
83.0
M2_65
82.8
M2_66
82.5
M2_67
82.3
M2_68
82.0
M2_69
81.9
M2_70
81.9
M2_71
81.8
M2_72
81.6
M2_73
81.6
M2_74
80.7
M2_75
80.1
M2_76
77.6
M2_77
77.6
M2_78
76.5
M2_79
76.4
M2_80
74.4
M2_81
73.9
M2_82
73.3
M2_83
72.8
M2_84
72.4
M2_85
72.4
M2_86
70.6
M2_87
69.2
M2_88
66.5
M2_89
65.6
M2_90
63.7
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Human Protein Atlas project is funded
