HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:461.7 nTPM
HPA Brain:792.8 nTPM
GTEx:461.7 nTPM
FANTOM5:627.2 Scaled Tags Per Million
Pig:387.0 nTPM
Mouse:508.0 nTPM
Allen mouse:27.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA071191Antibody HPA074390
Glial cells MediumNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 792.8
Sample id Sample description nTPM
Hippocampus
nTPM: 680.2
2621 Female, age 67, right hemisphere 898.1
2148 Female, age 91, left hemisphere 689.4
1855 Male, age 76, left hemisphere 681.6
1898 Male, age 80, left hemisphere 641.8
1911 Female, age 85, right hemisphere 594.0
2529 Female, age 94, left hemisphere 576.6
Dentate gyrus
nTPM: 657.0
2531 Female, age 67, both hemispheres 1052.9
1927 Female, age 91, both hemispheres 697.1
2010 Male, age 76, both hemispheres 682.3
2530 Female, age 94, left hemisphere 527.8
2528 Male, age 74, both hemispheres 508.6
2246 Female, age 85, both hemispheres 473.5
Entorhinal gyrus
nTPM: 322.8
2613 Female, age 94, left hemisphere 443.0
2686 Male, age 75, right hemisphere 328.4
2117 Female, age 91, right hemisphere 317.4
1938 Female, age 85, left hemisphere 293.3
1787 Male, age 76, left hemisphere 278.1
2764 Male, age 80, right hemisphere 276.8
Hippocampus, CA1
nTPM: 725.0
2749 Male, age 80, left hemisphere 966.9
2045 Male, age 76, both hemispheres 793.0
2527 Male, age 74, both hemispheres 787.8
1873 Female, age 85, both hemispheres 549.4
2082 Female, age 91, right hemisphere 527.9
Hippocampus, CA2
nTPM: 571.8
1963 Male, age 80, left hemisphere 892.3
1892 Male, age 76, both hemispheres 624.5
2113 Female, age 91, right hemisphere 618.1
1940 Female, age 85, left hemisphere 452.3
2249 Male, age 74, both hemispheres 447.2
2437 Female, age 94, left hemisphere 396.5
Hippocampus, CA3
nTPM: 792.8
2620 Female, age 94, left hemisphere 1092.5
2137 Male, age 80, left hemisphere 1053.8
2861 Female, age 67, both hemispheres 1053.8
1867 Male, age 76, both hemispheres 664.4
2436 Male, age 74, both hemispheres 492.1
1891 Female, age 85, both hemispheres 400.6
Parahippocampal cortex
nTPM: 406.6
2245 Female, age 91, both hemispheres 744.4
2693 Female, age 94, both hemispheres 502.9
2622 Female, age 67, right hemisphere 491.2
2018 Male, age 76, both hemispheres 440.2
2250 Female, age 67, right hemisphere 385.6
1850 Male, age 80, both hemispheres 358.2
1933 Female, age 85, both hemispheres 313.5
1990 Female, age 91, right hemisphere 308.0
2532 Female, age 72, left hemisphere 277.5
2692 Male, age 74, both hemispheres 244.0
Perirhinal gyrus
nTPM: 446.7
2521 Female, age 94, right hemisphere 711.1
1794 Male, age 80, right hemisphere 473.9
1841 Female, age 85, right hemisphere 404.9
1847 Female, age 91, left hemisphere 397.0
2848 Male, age 76, right hemisphere 246.7
Subiculum
nTPM: 375.5
2729 Female, age 91, right hemisphere 518.9
1901 Male, age 80, both hemispheres 468.5
2042 Male, age 76, both hemispheres 415.9
1977 Female, age 85, both hemispheres 321.1
2619 Male, age 74, both hemispheres 280.3
2438 Female, age 94, left hemisphere 248.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 461.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 461.7
Samples: 255

Max nTPM: 1821.4
Min nTPM: 9.4
Std nTPM: 314.6
Median nTPM: 404.2
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 1821.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1320.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 1294.9
GTEX-13VXU-0011-R1a-SM-GINAT 50-59 years, male 1294.6
GTEX-117XS-0011-R1b-SM-GJ3PQ 60-69 years, male 1259.6
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 1252.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 1252.1
GTEX-15DYW-0011-R1a-SM-H6Q6Q 60-69 years, female 1231.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1231.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 1186.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 1185.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 627.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 627.2
FF:10169-103B7 60 years, female 883.8
FF:10153-102I9 76 years, female 370.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 387.0
Pig sample Sample description nTPM
Subiculum
nTPM: 213.8
Samples: 4

Max nTPM: 272.1
Min nTPM: 167.4
Sample A Female 272.1
Sample B Female 190.8
Sample C Male 167.4
Sample D Male 224.7
Dorsal hippocampus
nTPM: 372.7
Samples: 4

Max nTPM: 483.1
Min nTPM: 160.8
Sample A Female 425.7
Sample B Female 483.1
Sample C Male 160.8
Sample D Male 421.3
Entorhinal cortex
nTPM: 357.4
Samples: 4

Max nTPM: 386.7
Min nTPM: 320.2
Sample A Female 386.7
Sample B Female 374.1
Sample C Male 348.5
Sample D Male 320.2
Ventral hippocampus
nTPM: 387.0
Samples: 4

Max nTPM: 560.3
Min nTPM: 209.4
Sample A Female 560.3
Sample B Female 308.7
Sample C Male 469.7
Sample D Male 209.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 508.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 361.4
Samples: 4

Max nTPM: 376.2
Min nTPM: 337.2
Sample A Male 376.2
Sample B Male 337.2
Sample C Female 367.4
Sample D Female 364.6
Hippocampal formation
nTPM: 508.0
Samples: 4

Max nTPM: 562.9
Min nTPM: 452.1
Sample A Male 470.6
Sample B Male 546.3
Sample C Female 562.9
Sample D Female 452.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 27.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 27.7
308054482 Antisense, RP_110407_01_B06, Mouse strain C57BL/6J (56 days, male) 27.7

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