We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PSD2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • PSD2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:44.6 nTPM
HPA Brain:140.2 nTPM
GTEx:44.6 nTPM
Pig:21.4 nTPM
Mouse:52.3 nTPM
Allen mouse:0.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

140.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 103.5
1961 Female, age 42, unknown 128.9
2226 Male, age 75, left hemisphere 78.1
Dorsomedial nucleus
nTPM: 140.2
1989 Male, age 62, unknown 175.3
2017 Female, age 42, unknown 136.0
2041 Female, age 72, unknown 109.4
Lateral hypothalamic area
nTPM: 86.9
1791 Male, age 80, right hemisphere 119.5
2412 Male, age 62, unknown 94.5
2271 Male, age 75, both hemispheres 73.8
2228 Male, age 66, unknown 60.0
Mammillary body
nTPM: 137.1
2413 Male, age 66, unknown 154.2
1945 Male, age 80, right hemisphere 145.7
1834 Female, age 42, unknown 141.2
1923 Female, age 72, unknown 140.0
1948 Female, age 72, unknown 104.2
Paraventricular nucleus
nTPM: 79.0
2700 Male, age 62, unknown 79.0
Preoptic area
nTPM: 127.5
1861 Female, age 42, unknown 155.5
2414 Female, age 72, unknown 117.3
1907 Male, age 80, right hemisphere 109.7
Supraoptic nucleus
nTPM: 103.0
1894 Female, age 72, unknown 123.4
2835 Female, age 72, unknown 94.6
2043 Male, age 62, unknown 91.2
Ventromedial nucleus
nTPM: 125.3
1822 Female, age 42, unknown 131.0
1982 Female, age 72, unknown 119.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 44.6
Samples: 257

Max nTPM: 178.5
Min nTPM: 9.8
Std nTPM: 17.3
Median nTPM: 41.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 178.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 95.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 90.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 90.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 88.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 86.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 79.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 78.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 77.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 76.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 75.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 75.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 74.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 73.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 73.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 72.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 72.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 72.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 72.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 71.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 70.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 69.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 68.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 67.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 67.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 67.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 66.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 66.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 65.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 64.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 61.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 61.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 60.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 60.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 60.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 59.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 59.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 59.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 59.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 59.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 59.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 58.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 58.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 57.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 57.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 57.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 57.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 57.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 56.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 56.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 56.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 55.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 55.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 54.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 53.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 53.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 53.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 53.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 53.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 53.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 53.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 53.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 52.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 52.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 52.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 52.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 51.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 50.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 50.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 50.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 50.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 50.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 50.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 50.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 50.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 49.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 49.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 49.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 49.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 49.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 49.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 49.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 49.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 48.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 48.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 48.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 48.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 48.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 47.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 47.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 47.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 47.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 47.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 46.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 46.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 46.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 46.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 46.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 46.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 46.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 45.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 45.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 45.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 45.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 45.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 45.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 45.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 44.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 44.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 44.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 44.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 44.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 44.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 43.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 43.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 43.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 43.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 43.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 43.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 43.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 43.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 42.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 42.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 42.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 42.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 42.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 42.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 42.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 41.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 41.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 41.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 41.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 41.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 41.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 40.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 40.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 40.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 40.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 40.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 40.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 40.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 40.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 40.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 40.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 39.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 39.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 39.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 39.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 39.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 39.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 39.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 39.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 39.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 38.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 38.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 38.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 38.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 38.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 38.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 38.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 38.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 38.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 38.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 38.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 38.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 38.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 38.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 38.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 37.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 37.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 37.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 37.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 37.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 36.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 36.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 35.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 35.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 35.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 35.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 35.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 35.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 35.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 34.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 34.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 34.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 34.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 34.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 34.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 33.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 33.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 33.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 33.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 33.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 33.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 33.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 33.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 33.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 33.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 33.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 32.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 32.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 32.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 31.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 31.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 31.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 31.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 30.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 30.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 30.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 30.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 30.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 30.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 30.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 30.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 29.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 29.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 29.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 28.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 28.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 28.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 28.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 27.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 27.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 27.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 27.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 27.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 27.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 27.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 26.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 26.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 26.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 26.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 26.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 25.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 25.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 25.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 25.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 24.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 24.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 24.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 24.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 23.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 23.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 22.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 22.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 22.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 22.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 21.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 21.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 21.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 21.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 21.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 20.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 20.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 19.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 16.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 9.8
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 21.4
Samples: 4

Max nTPM: 24.3
Min nTPM: 16.5
Sample A Female 24.3
Sample B Female 23.7
Sample C Male 21.0
Sample D Male 16.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 52.3
Samples: 4

Max nTPM: 54.3
Min nTPM: 51.5
Sample A Male 51.5
Sample B Male 54.3
Sample C Female 51.5
Sample D Female 52.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.4
73712870 Antisense, RP_051206_02_E11, Mouse strain C57BL/6J (56 days, male) 0.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo