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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:36.2 nTPM
HPA Brain:57.8 nTPM
GTEx:36.2 nTPM
Mouse:17.0 nTPM
Allen mouse:0.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

57.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 53.4
1961 Female, age 42, unknown 58.7
2226 Male, age 75, left hemisphere 48.1
Dorsomedial nucleus
nTPM: 51.7
2041 Female, age 72, unknown 52.6
2017 Female, age 42, unknown 52.1
1989 Male, age 62, unknown 50.2
Lateral hypothalamic area
nTPM: 50.8
2228 Male, age 66, unknown 59.7
2271 Male, age 75, both hemispheres 50.6
1791 Male, age 80, right hemisphere 50.3
2412 Male, age 62, unknown 42.6
Mammillary body
nTPM: 55.8
1945 Male, age 80, right hemisphere 61.8
1834 Female, age 42, unknown 60.5
1948 Female, age 72, unknown 54.8
1923 Female, age 72, unknown 54.7
2413 Male, age 66, unknown 47.4
Paraventricular nucleus
nTPM: 53.4
2700 Male, age 62, unknown 53.4
Preoptic area
nTPM: 53.2
2414 Female, age 72, unknown 59.7
1861 Female, age 42, unknown 51.3
1907 Male, age 80, right hemisphere 48.7
Supraoptic nucleus
nTPM: 57.8
1894 Female, age 72, unknown 63.0
2043 Male, age 62, unknown 60.4
2835 Female, age 72, unknown 49.9
Ventromedial nucleus
nTPM: 53.9
1982 Female, age 72, unknown 57.5
1822 Female, age 42, unknown 50.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 36.2
Samples: 257

Max nTPM: 59.7
Min nTPM: 18.6
Std nTPM: 6.5
Median nTPM: 35.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 59.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 55.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 54.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 54.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 53.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 53.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 52.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 52.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 51.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 50.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 50.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 50.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 50.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 49.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 48.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 48.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 48.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 47.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 47.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 46.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 46.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 46.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 45.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 45.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 44.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 44.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 43.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 43.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 43.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 43.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 43.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 42.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 42.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 42.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 42.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 42.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 42.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 42.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 42.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 42.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 42.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 41.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 41.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 41.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 41.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 41.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 41.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 41.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 40.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 40.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 40.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 40.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 40.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 40.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 40.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 40.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 40.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 40.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 39.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 39.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 39.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 39.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 39.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 39.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 39.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 39.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 39.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 39.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 38.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 38.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 38.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 38.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 38.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 38.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 38.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 38.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 38.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 38.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 38.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 38.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 38.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 38.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 38.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 38.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 37.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 37.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 37.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 37.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 37.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 37.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 37.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 37.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 37.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 37.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 37.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 37.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 37.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 37.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 37.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 37.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 37.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 37.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 37.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 37.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 37.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 37.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 36.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 36.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 36.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 36.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 36.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 36.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 36.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 36.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 36.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 36.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 36.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 36.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 36.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 36.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 36.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 35.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 35.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 35.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 35.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 35.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 35.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 35.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 35.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 35.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 35.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 35.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 35.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 35.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 35.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 35.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 35.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 35.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 35.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 35.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 35.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 35.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 35.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 35.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 35.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 35.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 35.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 34.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 34.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 34.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 34.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 34.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 34.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 34.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 34.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 34.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 34.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 34.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 34.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 34.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 33.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 33.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 33.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 33.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 33.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 33.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 33.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 33.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 33.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 33.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 33.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 33.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 33.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 33.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 33.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 33.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 33.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 32.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 32.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 32.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 32.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 32.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 32.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 32.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 32.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 32.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 32.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 32.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 32.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 32.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 32.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 31.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 31.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 31.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 31.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 31.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 31.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 31.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 31.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 31.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 31.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 31.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 31.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 31.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 30.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 30.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 30.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 30.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 30.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 30.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 30.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 30.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 30.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 30.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 30.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 30.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 30.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 30.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 30.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 30.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 30.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 29.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 29.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 29.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 29.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 29.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 29.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 29.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 29.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 29.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 29.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 28.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 28.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 28.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 28.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 28.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 28.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 28.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 27.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 27.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 27.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 27.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 27.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 26.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 26.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 26.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 26.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 25.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 25.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 25.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 25.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 24.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 24.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 22.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 22.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 20.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 18.6
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HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

17.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 17.0
Samples: 4

Max nTPM: 18.1
Min nTPM: 15.7
Sample A Male 18.1
Sample B Male 17.0
Sample C Female 17.2
Sample D Female 15.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.2
75043154 Antisense, RP_060412_05_B05, Mouse strain C57BL/6J (56 days, male) 0.4
71724660 Antisense, RP_050921_01_D06, Mouse strain C57BL/6J (56 days, male) 0.0

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