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BETA
  • SUMMARY

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  • RPL10
EVOLUTIONARY MEDULLA OBLONGATA Show tissue menu
BRAIN55 EYE3 ENDOCRINE TISSUES4 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER2 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM6 BREAST & FEMALE REPRODUCTIVE SYSTEM9 MUSCLE & VASCULAR TISSUE11 CONNECTIVE & SOFT TISSUE14 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CLAUSTRUM CUNEUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI
MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREOPTIC AREA
PUTAMEN SEPTUM SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS THALAMUS VENTRAL SPINAL CORD WHITE MATTER
CORNEA LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
DUCTUS DEFERENS EPIDIDYMIS PENIS PROSTATE SEMINAL VESICLE TESTIS
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:725.0 nTPM
FANTOM5:41.2 Scaled Tags Per Million
Macaque:2.5 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

725.0
Sample id Sample description nTPM
Area postrema
nTPM: 599.2
2306 Male, age 80, both hemispheres 702.7
2799 Male, age 61, both hemispheres 696.9
2054 Male, age 76, both hemispheres 398.0
Dorsal medullary reticular nucleus
nTPM: 467.8
2373 Male, age 61, both hemispheres 505.5
2040 Female, age 85, both hemispheres 495.2
2088 Male, age 76, both hemispheres 402.7
Dorsal motor vagal complex
nTPM: 529.6
2797 Male, age 61, both hemispheres 751.2
2643 Male, age 74, both hemispheres 621.4
2807 Female, age 85, both hemispheres 618.8
2133 Female, age 91, both hemispheres 502.7
2844 Male, age 55, unknown 468.7
2000 Male, age 74, unknown 461.0
2185 Male, age 76, both hemispheres 441.6
2813 Female, age 72, unknown 371.3
Gigantocellular reticular nuclei, medullary
nTPM: 503.3
2314 Male, age 61, both hemispheres 575.2
2387 Female, age 91, both hemispheres 534.7
1876 Female, age 85, both hemispheres 491.9
2310 Male, age 80, both hemispheres 478.4
2462 Male, age 74, both hemispheres 470.9
2022 Male, age 76, right hemisphere 468.7
Gigantocellular reticular nuclei, pars
nTPM: 399.7
2084 Female, age 85, both hemispheres 466.3
2706 Male, age 80, both hemispheres 404.9
2336 Male, age 61, both hemispheres 384.0
2330 Male, age 80, both hemispheres 372.1
2168 Male, age 76, both hemispheres 371.3
Inferior olive
nTPM: 574.3
2178 Male, age 61, both hemispheres 610.6
2563 Male, age 74, both hemispheres 606.2
2379 Male, age 80, both hemispheres 594.4
2085 Female, age 85, both hemispheres 574.5
2628 Female, age 91, both hemispheres 485.7
Lateral medullary reticular nucleus
nTPM: 578.6
2852 Male, age 80, both hemispheres 724.4
2190 Female, age 85, both hemispheres 635.7
2305 Male, age 74, both hemispheres 584.9
2804 Female, age 91, both hemispheres 568.4
2374 Male, age 61, both hemispheres 493.8
2044 Male, age 76, both hemispheres 464.2
Medial olivary nucleus
nTPM: 711.0
1943 Male, age 61, both hemispheres 859.6
1962 Male, age 76, both hemispheres 777.7
2138 Female, age 91, both hemispheres 645.5
2851 Male, age 80, both hemispheres 561.1
Medial vestibular nucleus
nTPM: 467.0
2743 Female, age 85, both hemispheres 497.1
2803 Female, age 91, both hemispheres 496.0
2093 Male, age 80, both hemispheres 487.2
2624 Male, age 61, both hemispheres 472.2
2801 Male, age 74, both hemispheres 465.4
2134 Male, age 76, both hemispheres 384.2
Motor hypoglossal nucleus
nTPM: 456.3
2132 Female, age 85, both hemispheres 552.4
2182 Male, age 80, both hemispheres 548.1
2125 Female, age 91, both hemispheres 515.2
2277 Male, age 76, both hemispheres 393.7
2461 Male, age 61, both hemispheres 272.2
Nucleus ambiguus
nTPM: 543.4
2071 Male, age 76, both hemispheres 682.2
2096 Female, age 85, both hemispheres 404.6
Nucleus cuneatus
nTPM: 516.8
2808 Female, age 85, both hemispheres 683.6
2380 Male, age 80, both hemispheres 614.4
2564 Male, age 74, both hemispheres 581.7
2376 Male, age 61, both hemispheres 529.4
2381 Male, age 80, both hemispheres 508.6
2805 Female, age 91, both hemispheres 499.1
2562 Male, age 61, both hemispheres 462.4
2100 Male, age 76, both hemispheres 415.5
2131 Male, age 76, both hemispheres 356.1
Nucleus gracilis
nTPM: 621.5
2299 Female, age 85, both hemispheres 681.5
2382 Male, age 80, both hemispheres 654.5
2627 Male, age 74, both hemispheres 528.7
Nucleus raphe obscurus
nTPM: 633.4
2142 Male, age 76, midline 688.4
2845 Female, age 85, midline 617.3
2800 Male, age 61, midline 594.6
Nucleus raphe pallidus
nTPM: 725.0
1924 Male, age 61, midline 1004.1
2145 Male, age 76, midline 644.3
2183 Male, age 80, midline 526.6
Nucleus tractus solitarii
nTPM: 458.8
2191 Female, age 85, both hemispheres 578.6
2144 Female, age 91, right hemisphere 451.5
2307 Male, age 80, both hemispheres 407.1
2656 Male, age 76, both hemispheres 397.9
Parvicellular reticular nuclei
nTPM: 469.7
2119 Male, age 80, both hemispheres 521.2
2095 Male, age 76, both hemispheres 500.9
2558 Male, age 74, both hemispheres 387.0
Parvicellular reticular nuclei, medullary
nTPM: 473.3
2091 Female, age 85, both hemispheres 503.8
2189 Female, age 91, both hemispheres 475.2
2181 Male, age 80, left hemisphere 440.8
Peritrigeminal nucleus
nTPM: 624.9
2067 Female, age 85, both hemispheres 777.0
2136 Male, age 76, both hemispheres 588.9
2179 Male, age 61, both hemispheres 508.8
Prepositus hypoglossal nucleus
nTPM: 569.7
2855 Female, age 85, right hemisphere 571.3
2086 Male, age 80, both hemispheres 568.0
Spinal trigeminal nucleus, caudal
nTPM: 471.4
2308 Male, age 80, both hemispheres 518.1
2642 Male, age 74, both hemispheres 504.9
2312 Male, age 61, both hemispheres 474.5
2447 Male, age 76, both hemispheres 434.7
2390 Female, age 91, both hemispheres 424.6
Spinal trigeminal nucleus, interpolar
nTPM: 478.7
2033 Male, age 80, both hemispheres 560.8
2386 Female, age 85, both hemispheres 500.6
2066 Male, age 76, right hemisphere 494.4
2389 Female, age 91, both hemispheres 450.4
2625 Male, age 61, both hemispheres 387.2
Spinal vestibular nucleus
nTPM: 545.7
2384 Male, age 74, both hemispheres 744.9
2780 Male, age 80, both hemispheres 572.1
2748 Male, age 76, both hemispheres 513.3
2806 Female, age 85, both hemispheres 502.8
2186 Female, age 91, both hemispheres 470.6
2796 Male, age 61, both hemispheres 470.6
Superior vestibular nucleus
nTPM: 560.6
2015 Male, age 80, both hemispheres 616.9
2383 Male, age 74, both hemispheres 559.1
2061 Male, age 76, both hemispheres 505.7
Ventral medullary reticular nucleus
nTPM: 531.3
2372 Male, age 61, both hemispheres 588.1
2060 Male, age 76, both hemispheres 474.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 609.7
2118 Male, age 80, both hemispheres 750.1
2302 Female, age 91, both hemispheres 593.8
2741 Female, age 85, both hemispheres 586.2
1986 Male, age 76, both hemispheres 574.3
2180 Male, age 61, both hemispheres 544.0

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

41.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 41.2
FF:10155-103A2 76 years, female 52.5
FF:10174-103C3 60 years, female 36.6
FF:10038-101F2 18-64 years, mixed 34.6

MEDULLA OBLONGATA - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2.5
Macaque sample Sample description nTPM
Medulla oblongata
nTPM: 2.5
Samples: 1

Max nTPM: 2.5
Min nTPM: 2.5
Sample A 2.5

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