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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:845.2 nTPM
HPA Brain:463.7 nTPM
GTEx:845.2 nTPM
Pig:306.8 nTPM
Mouse:554.0 nTPM
Allen mouse:6.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

463.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 334.3
1961 Female, age 42, unknown 344.3
2226 Male, age 75, left hemisphere 324.3
Dorsomedial nucleus
nTPM: 354.5
2017 Female, age 42, unknown 367.0
1989 Male, age 62, unknown 361.9
2041 Female, age 72, unknown 334.5
Lateral hypothalamic area
nTPM: 437.0
1791 Male, age 80, right hemisphere 484.8
2271 Male, age 75, both hemispheres 437.9
2228 Male, age 66, unknown 428.4
2412 Male, age 62, unknown 396.9
Mammillary body
nTPM: 440.0
1945 Male, age 80, right hemisphere 454.1
1834 Female, age 42, unknown 447.9
1948 Female, age 72, unknown 443.9
1923 Female, age 72, unknown 441.7
2413 Male, age 66, unknown 412.5
Paraventricular nucleus
nTPM: 388.8
2700 Male, age 62, unknown 388.8
Preoptic area
nTPM: 366.9
1861 Female, age 42, unknown 399.2
2414 Female, age 72, unknown 379.0
1907 Male, age 80, right hemisphere 322.4
Supraoptic nucleus
nTPM: 463.7
2043 Male, age 62, unknown 495.2
1894 Female, age 72, unknown 483.2
2835 Female, age 72, unknown 412.8
Ventromedial nucleus
nTPM: 355.0
1982 Female, age 72, unknown 404.9
1822 Female, age 42, unknown 305.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

845.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 845.2
Samples: 257

Max nTPM: 3249.9
Min nTPM: 261.4
Std nTPM: 330.9
Median nTPM: 778.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 3249.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 2449.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 2099.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 2009.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 1864.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 1806.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 1692.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 1587.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 1506.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 1440.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 1436.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 1384.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 1358.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 1336.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 1316.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1314.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 1310.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1296.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 1295.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 1278.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 1269.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 1263.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 1248.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 1245.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 1232.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 1231.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 1228.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 1221.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 1220.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 1211.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 1197.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 1196.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 1171.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 1166.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 1122.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 1120.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 1117.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 1095.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 1092.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 1084.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 1077.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 1075.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 1068.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 1057.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 1047.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 1041.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 1035.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 1034.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 1030.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 1026.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 1019.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 1017.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 1014.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 1012.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 1010.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 987.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 962.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 958.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 955.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 953.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 945.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 944.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 944.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 942.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 941.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 941.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 941.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 936.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 936.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 931.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 926.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 924.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 918.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 911.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 910.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 907.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 902.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 902.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 901.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 900.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 897.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 895.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 892.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 888.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 876.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 873.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 869.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 868.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 865.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 860.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 858.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 857.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 855.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 851.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 851.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 850.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 844.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 843.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 841.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 837.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 836.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 834.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 833.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 831.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 830.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 821.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 819.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 818.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 818.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 815.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 814.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 812.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 811.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 809.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 807.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 804.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 803.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 802.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 798.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 793.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 789.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 788.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 787.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 783.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 780.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 779.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 779.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 778.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 778.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 778.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 776.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 773.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 768.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 767.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 767.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 766.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 765.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 764.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 764.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 763.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 762.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 758.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 756.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 755.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 755.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 753.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 753.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 753.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 753.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 753.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 752.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 744.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 739.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 738.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 731.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 731.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 730.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 729.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 726.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 723.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 720.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 719.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 717.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 716.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 712.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 709.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 707.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 700.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 694.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 691.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 691.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 684.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 677.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 674.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 672.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 668.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 666.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 664.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 663.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 659.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 658.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 658.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 655.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 655.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 654.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 652.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 652.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 650.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 648.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 647.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 646.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 645.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 644.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 637.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 637.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 635.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 635.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 631.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 630.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 624.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 624.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 623.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 619.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 619.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 612.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 612.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 610.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 610.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 605.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 605.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 602.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 600.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 599.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 599.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 590.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 586.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 586.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 584.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 583.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 583.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 582.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 581.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 574.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 571.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 569.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 569.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 567.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 567.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 566.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 564.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 563.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 561.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 560.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 553.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 550.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 550.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 547.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 545.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 544.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 538.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 523.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 513.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 505.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 501.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 489.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 481.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 479.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 475.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 467.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 461.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 461.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 450.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 446.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 445.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 291.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 285.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 261.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

306.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 306.8
Samples: 4

Max nTPM: 429.6
Min nTPM: 186.0
Sample A Female 429.6
Sample B Female 296.0
Sample C Male 315.4
Sample D Male 186.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

554.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 554.0
Samples: 4

Max nTPM: 667.5
Min nTPM: 473.1
Sample A Male 592.5
Sample B Male 667.5
Sample C Female 483.0
Sample D Female 473.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 6.5
74580990 Antisense, RP_060215_02_C09, Mouse strain C57BL/6J (56 days, male) 6.5

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