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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
5503.8
nTPM
Monaco:
619.2
nTPM
Schmiedel:
822.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
5503.8
HPA sample
nTPM
gdT-cell nTPM: 2915.1
Samples: 6
Max nTPM: 3309.4
Min nTPM: 2097.3
P10809_1007
3227.2
P10809_1022
3266.3
P10809_1041
3309.4
P10809_1060
2097.3
P10809_1077
2681.3
P10809_1098
2909.3
MAIT T-cell nTPM: 3996.1
Samples: 6
Max nTPM: 5009.2
Min nTPM: 3055.4
P10809_1006
3055.4
P10809_1024
4198.3
P10809_1043
4244.5
P10809_1062
4069.7
P10809_1083
3399.7
P10809_1097
5009.2
Memory CD4 T-cell nTPM: 4705.9
Samples: 6
Max nTPM: 5799.7
Min nTPM: 3675.9
P10809_1014
4533.9
P10809_1026
5799.7
P10809_1045
5153.0
P10809_1064
4187.2
P10809_1086
3675.9
P10809_1113
4885.6
Memory CD8 T-cell nTPM: 3731.4
Samples: 5
Max nTPM: 4383.7
Min nTPM: 3396.5
P10809_1012
3528.8
P10809_1027
3551.3
P10809_1046
4383.7
P10809_1065
3396.5
P10809_1111
3796.5
Naive CD4 T-cell nTPM: 5503.9
Samples: 6
Max nTPM: 6286.9
Min nTPM: 4220.2
P10809_1015
5186.8
P10809_1030
6092.1
P10809_1049
6286.9
P10809_1068
5665.3
P10809_1085
4220.2
P10809_1112
5571.8
Naive CD8 T-cell nTPM: 4379.4
Samples: 6
Max nTPM: 5781.9
Min nTPM: 2847.8
P10809_1016
5781.9
P10809_1031
4370.5
P10809_1050
4376.5
P10809_1069
4457.2
P10809_1087
2847.8
P10809_1110
4442.5
T-reg nTPM: 3807.5
Samples: 6
Max nTPM: 4460.6
Min nTPM: 2907.7
P10809_1018
2907.7
P10809_1037
3801.0
P10809_1056
4460.6
P10809_1075
3896.7
P10809_1094
4069.0
P10809_1106
3710.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
619.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 448.8
Samples: 4
Max nTPM: 680.7
Min nTPM: 224.5
RHH5202_R3573
224.5
RHH5230_R3602
496.9
RHH5259_R3631
680.7
RHH5288_R3660
393.0
Effector memory CD8 T-cell nTPM: 235.8
Samples: 4
Max nTPM: 448.2
Min nTPM: 150.5
RHH5203_R3574
150.5
RHH5231_R3603
192.5
RHH5260_R3632
448.2
RHH5289_R3661
152.0
MAIT T-cell nTPM: 389.0
Samples: 4
Max nTPM: 455.5
Min nTPM: 249.0
RHH5233_R3605
249.0
RHH5205_R3576
455.5
RHH5262_R3634
448.4
RHH5297_R3663
403.0
Memory CD4 T-cell TFH nTPM: 316.6
Samples: 4
Max nTPM: 443.8
Min nTPM: 231.8
RHH5300_R3666
314.5
RHH5236_R3608
443.8
RHH5265_R3637
276.3
RHH5208_R3579
231.8
Memory CD4 T-cell Th1 nTPM: 578.6
Samples: 4
Max nTPM: 921.6
Min nTPM: 249.6
RHH5210_R3581
249.6
RHH5302_R3668
493.4
RHH5238_R3610
921.6
RHH5267_R3639
649.9
Memory CD4 T-cell Th1/Th17 nTPM: 476.6
Samples: 4
Max nTPM: 664.4
Min nTPM: 304.2
RHH5303_R3669
399.0
RHH5211_R3582
304.2
RHH5239_R3611
538.9
RHH5268_R3640
664.4
Memory CD4 T-cell Th17 nTPM: 460.0
Samples: 4
Max nTPM: 632.2
Min nTPM: 296.2
RHH5304_R3670
632.2
RHH5212_R3583
296.2
RHH5240_R3612
464.9
RHH5269_R3641
446.6
Memory CD4 T-cell Th2 nTPM: 485.8
Samples: 4
Max nTPM: 780.7
Min nTPM: 359.6
RHH5305_R3671
780.7
RHH5213_R3584
369.0
RHH5241_R3613
359.6
RHH5270_R3642
433.7
Naive CD4 T-cell nTPM: 619.2
Samples: 4
Max nTPM: 789.9
Min nTPM: 387.6
RHH5306_R3672
789.9
RHH5214_R3585
728.5
RHH5242_R3614
387.6
RHH5271_R3643
570.6
Naive CD8 T-cell nTPM: 479.3
Samples: 4
Max nTPM: 708.6
Min nTPM: 289.6
RHH5201_R3572
293.4
RHH5229_R3601
708.6
RHH5258_R3630
289.6
RHH5287_R3659
625.4
Non-Vd2 gdTCR nTPM: 327.2
Samples: 4
Max nTPM: 405.8
Min nTPM: 264.1
RHH5235_R3607
405.8
RHH5264_R3636
275.3
RHH5207_R3578
264.1
RHH5299_R3665
363.4
T-reg nTPM: 423.3
Samples: 4
Max nTPM: 481.3
Min nTPM: 275.4
RHH5301_R3667
457.9
RHH5237_R3609
275.4
RHH5266_R3638
478.6
RHH5209_R3580
481.3
Terminal effector memory CD4 T-cell nTPM: 294.6
Samples: 2
Max nTPM: 325.0
Min nTPM: 264.1
RHH5243_R3615
325.0
RHH5272_R3644
264.1
Terminal effector memory CD8 T-cell nTPM: 399.3
Samples: 4
Max nTPM: 621.9
Min nTPM: 157.0
RHH5232_R3604
157.0
RHH5204_R3575
621.9
RHH5261_R3633
557.1
RHH5296_R3662
261.1
Vd2 gdTCR nTPM: 545.3
Samples: 4
Max nTPM: 823.0
Min nTPM: 311.6
RHH5234_R3606
311.6
RHH5206_R3577
823.0
RHH5263_R3635
522.0
RHH5298_R3664
524.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.