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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • QDPR
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:412.6 nTPM
GTEx:610.3 nTPM
FANTOM5:256.8 Scaled Tags Per Million
Macaque:285.1 nTPM
Pig:185.0 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

412.6
Sample id Sample description nTPM
Putamen
nTPM: 412.6
1829 Male, age 74, unknown 529.1
2489 Female, age 72, unknown 486.5
2647 Male, age 75, left hemisphere 475.8
2482 Female, age 94, left hemisphere 460.5
2466 Female, age 79, unknown 411.9
1937 Female, age 91, right hemisphere 317.3
1838 Male, age 80, right hemisphere 206.9

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

610.3
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 610.3
Samples: 254

Max nTPM: 1930.0
Min nTPM: 121.1
Std nTPM: 275.2
Median nTPM: 580.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1930.0
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 1786.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1549.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1544.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 1442.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1436.0
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 1242.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 1146.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1143.4
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 1086.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1052.7
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 1051.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1029.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 1028.2
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 1023.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1022.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1021.7
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 1000.1
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 1000.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 998.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 989.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 985.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 983.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 965.4
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 964.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 945.7
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 944.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 930.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 914.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 898.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 888.5
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 884.1
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 884.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 876.5
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 866.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 863.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 862.4
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 861.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 853.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 845.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 843.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 837.8
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 835.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 834.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 830.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 825.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 825.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 821.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 811.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 808.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 803.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 792.0
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 790.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 780.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 777.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 774.0
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 773.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 770.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 770.6
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 767.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 759.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 758.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 754.8
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 748.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 746.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 743.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 742.0
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 741.4
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 734.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 733.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 733.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 729.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 724.9
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 722.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 720.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 715.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 714.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 714.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 709.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 709.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 709.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 705.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 701.8
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 699.5
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 698.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 689.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 685.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 681.0
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 679.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 676.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 675.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 673.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 670.8
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 669.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 669.9
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 656.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 656.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 649.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 646.7
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 643.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 641.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 637.7
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 635.9
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 625.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 623.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 622.7
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 621.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 621.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 610.5
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 609.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 608.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 606.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 603.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 602.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 601.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 598.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 597.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 596.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 595.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 590.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 589.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 587.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 584.6
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 583.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 582.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 582.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 581.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 578.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 577.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 575.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 574.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 573.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 573.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 572.9
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 571.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 571.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 571.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 566.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 564.4
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 561.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 561.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 559.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 555.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 552.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 546.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 544.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 536.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 535.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 531.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 527.1
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 526.1
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 525.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 525.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 522.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 521.3
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 513.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 513.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 509.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 501.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 501.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 497.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 496.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 495.6
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 494.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 492.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 491.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 490.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 486.6
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 486.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 483.8
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 478.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 475.6
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 474.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 473.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 472.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 470.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 469.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 462.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 462.6
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 461.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 455.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 452.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 448.6
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 446.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 443.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 441.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 437.3
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 424.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 422.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 418.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 416.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 411.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 408.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 400.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 396.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 395.5
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 391.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 391.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 389.8
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 388.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 382.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 382.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 381.6
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 380.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 374.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 373.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 373.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 368.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 366.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 365.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 363.4
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 361.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 354.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 353.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 350.7
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 350.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 348.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 345.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 336.3
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 333.3
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 328.3
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 326.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 320.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 314.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 313.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 307.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 301.1
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 301.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 296.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 293.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 287.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 278.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 276.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 273.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 264.0
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 261.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 256.5
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 256.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 247.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 246.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 240.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 240.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 235.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 208.0
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 203.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 203.1
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 189.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 184.9
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 181.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 180.8
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 167.8
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 148.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 132.4
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 121.1
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

256.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 256.8
FF:10176-103C5 60 years, female 256.8

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

285.1
Macaque sample Sample description nTPM
Putamen
nTPM: 285.1
Samples: 2

Max nTPM: 288.5
Min nTPM: 281.7
Sample A 288.5
Sample B 281.7

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

185.0
Pig sample Sample description nTPM
Putamen
nTPM: 185.0
Samples: 3

Max nTPM: 251.6
Min nTPM: 106.8
Sample B Female 106.8
Sample C Male 196.6
Sample D Male 251.6

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