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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

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  • EVOLUTION

  • SPARCL1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:716.7 nTPM
GTEx:1210.9 nTPM
FANTOM5:2412.3 Scaled Tags Per Million
Macaque:472.3 nTPM
Pig:786.9 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

716.7
Sample id Sample description nTPM
Putamen
nTPM: 716.7
2482 Female, age 94, left hemisphere 1243.2
1838 Male, age 80, right hemisphere 812.6
1937 Female, age 91, right hemisphere 646.6
2489 Female, age 72, unknown 632.5
1829 Male, age 74, unknown 605.8
2647 Male, age 75, left hemisphere 540.6
2466 Female, age 79, unknown 535.4

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1210.9
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 1210.9
Samples: 254

Max nTPM: 2948.7
Min nTPM: 239.5
Std nTPM: 527.9
Median nTPM: 1194.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 2948.7
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 2721.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 2642.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 2626.9
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 2622.2
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 2510.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 2398.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 2391.4
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 2301.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 2300.1
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 2244.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 2196.8
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 2124.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 2121.3
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 2071.8
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 2063.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 2063.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 2053.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 2052.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 2029.0
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 2027.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 1977.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 1954.7
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 1933.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1869.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 1865.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1861.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1847.6
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 1834.9
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 1831.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1809.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1790.5
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 1784.0
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 1755.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1738.0
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 1735.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1735.4
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 1735.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 1728.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1707.4
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 1699.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 1690.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 1684.6
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 1676.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1672.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 1669.6
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 1667.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 1667.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 1662.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 1658.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1646.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 1626.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1625.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1603.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1580.6
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 1578.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 1567.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 1563.5
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 1556.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1555.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1551.6
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 1549.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 1548.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 1544.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1531.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 1517.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 1515.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1514.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 1506.6
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 1500.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 1489.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 1475.0
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 1470.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 1468.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 1454.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1451.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1444.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1443.6
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 1440.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 1431.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 1429.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1428.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 1417.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 1412.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1406.2
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 1402.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1396.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 1395.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1388.9
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 1377.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 1377.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 1374.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 1371.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 1368.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 1362.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 1355.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1347.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 1341.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1334.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 1314.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 1305.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 1302.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1299.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 1295.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 1292.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1281.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1279.4
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 1278.1
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 1267.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1255.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 1254.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 1251.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 1248.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 1240.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 1238.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1237.7
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 1234.9
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 1232.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 1232.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1230.3
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 1226.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 1221.9
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 1216.4
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 1213.6
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 1211.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 1201.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 1198.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1190.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1177.8
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 1176.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 1174.4
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 1174.1
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 1168.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 1165.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1157.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1149.4
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 1145.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1140.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1119.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 1118.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 1112.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 1102.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 1098.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 1098.3
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 1088.5
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 1088.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 1086.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 1075.3
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 1074.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 1074.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 1072.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 1069.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 1068.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 1065.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1057.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 1041.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 1038.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 1034.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1019.7
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 1017.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 1014.0
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 999.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 996.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 984.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 983.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 979.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 966.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 963.6
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 955.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 954.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 950.5
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 948.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 946.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 945.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 938.5
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 909.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 901.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 896.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 893.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 890.7
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 877.2
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 876.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 874.6
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 873.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 863.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 855.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 844.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 834.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 830.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 829.0
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 811.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 800.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 797.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 791.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 787.8
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 787.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 786.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 775.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 768.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 767.6
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 738.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 738.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 726.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 721.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 718.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 701.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 701.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 701.1
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 695.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 684.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 676.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 672.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 667.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 662.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 649.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 644.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 636.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 628.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 628.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 626.9
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 626.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 620.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 599.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 599.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 591.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 589.7
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 588.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 586.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 581.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 580.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 579.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 576.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 567.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 558.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 547.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 536.7
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 432.0
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 412.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 402.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 380.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 368.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 366.3
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 341.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 334.7
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 322.0
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 312.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 302.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 298.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 292.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 289.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 288.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 255.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 240.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 239.5
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2412.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 2412.3
FF:10176-103C5 60 years, female 2412.3

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

472.3
Macaque sample Sample description nTPM
Putamen
nTPM: 472.3
Samples: 2

Max nTPM: 623.6
Min nTPM: 321.0
Sample A 321.0
Sample B 623.6

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

786.9
Pig sample Sample description nTPM
Putamen
nTPM: 786.9
Samples: 3

Max nTPM: 873.1
Min nTPM: 710.5
Sample B Female 710.5
Sample C Male 873.1
Sample D Male 777.1

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