HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:76.8 nTPM
HPA Brain:84.5 nTPM
GTEx:76.8 nTPM
FANTOM5:123.0 Scaled Tags Per Million
Pig:114.9 nTPM
Mouse:126.3 nTPM
Allen mouse:0.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003734
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 84.5
Sample id Sample description nTPM
Hippocampus
nTPM: 71.7
1898 Male, age 80, left hemisphere 93.1
2621 Female, age 67, right hemisphere 69.5
2529 Female, age 94, left hemisphere 68.7
1855 Male, age 76, left hemisphere 68.5
1911 Female, age 85, right hemisphere 67.5
2148 Female, age 91, left hemisphere 62.9
Dentate gyrus
nTPM: 73.4
2528 Male, age 74, both hemispheres 83.2
2010 Male, age 76, both hemispheres 82.4
1927 Female, age 91, both hemispheres 79.7
2530 Female, age 94, left hemisphere 72.5
2246 Female, age 85, both hemispheres 67.2
2531 Female, age 67, both hemispheres 55.3
Entorhinal gyrus
nTPM: 74.9
2764 Male, age 80, right hemisphere 86.5
1938 Female, age 85, left hemisphere 84.4
2613 Female, age 94, left hemisphere 79.3
2117 Female, age 91, right hemisphere 75.9
1787 Male, age 76, left hemisphere 74.8
2686 Male, age 75, right hemisphere 48.6
Hippocampus, CA1
nTPM: 81.5
2749 Male, age 80, left hemisphere 116.2
1873 Female, age 85, both hemispheres 79.1
2045 Male, age 76, both hemispheres 74.2
2527 Male, age 74, both hemispheres 73.3
2082 Female, age 91, right hemisphere 64.4
Hippocampus, CA2
nTPM: 81.5
2249 Male, age 74, both hemispheres 99.2
1963 Male, age 80, left hemisphere 93.0
1892 Male, age 76, both hemispheres 90.5
1940 Female, age 85, left hemisphere 76.0
2437 Female, age 94, left hemisphere 65.3
2113 Female, age 91, right hemisphere 65.2
Hippocampus, CA3
nTPM: 76.6
2137 Male, age 80, left hemisphere 93.0
2436 Male, age 74, both hemispheres 83.5
1867 Male, age 76, both hemispheres 82.5
2620 Female, age 94, left hemisphere 79.6
1891 Female, age 85, both hemispheres 69.4
2861 Female, age 67, both hemispheres 51.4
Parahippocampal cortex
nTPM: 69.2
1850 Male, age 80, both hemispheres 84.3
1990 Female, age 91, right hemisphere 80.9
1933 Female, age 85, both hemispheres 78.5
2250 Female, age 67, right hemisphere 76.7
2245 Female, age 91, both hemispheres 69.6
2018 Male, age 76, both hemispheres 69.1
2693 Female, age 94, both hemispheres 68.8
2532 Female, age 72, left hemisphere 64.8
2692 Male, age 74, both hemispheres 51.5
2622 Female, age 67, right hemisphere 47.5
Perirhinal gyrus
nTPM: 84.5
1847 Female, age 91, left hemisphere 100.5
1794 Male, age 80, right hemisphere 93.4
1841 Female, age 85, right hemisphere 87.9
2521 Female, age 94, right hemisphere 73.2
2848 Male, age 76, right hemisphere 67.4
Subiculum
nTPM: 69.2
1977 Female, age 85, both hemispheres 86.1
1901 Male, age 80, both hemispheres 77.1
2619 Male, age 74, both hemispheres 67.5
2042 Male, age 76, both hemispheres 67.0
2729 Female, age 91, right hemisphere 63.6
2438 Female, age 94, left hemisphere 53.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 76.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 76.8
Samples: 255

Max nTPM: 125.8
Min nTPM: 45.0
Std nTPM: 17.9
Median nTPM: 74.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 125.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 123.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 123.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 119.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 117.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 116.0
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 115.8
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 115.8
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 112.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 112.0
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 111.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 123.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 123.0
FF:10169-103B7 60 years, female 132.9
FF:10153-102I9 76 years, female 113.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 114.9
Pig sample Sample description nTPM
Subiculum
nTPM: 95.9
Samples: 4

Max nTPM: 120.0
Min nTPM: 83.1
Sample A Female 120.0
Sample B Female 84.2
Sample C Male 96.3
Sample D Male 83.1
Dorsal hippocampus
nTPM: 114.9
Samples: 4

Max nTPM: 148.1
Min nTPM: 89.0
Sample A Female 148.1
Sample B Female 117.8
Sample C Male 104.8
Sample D Male 89.0
Entorhinal cortex
nTPM: 97.1
Samples: 4

Max nTPM: 104.7
Min nTPM: 87.1
Sample A Female 102.5
Sample B Female 104.7
Sample C Male 94.0
Sample D Male 87.1
Ventral hippocampus
nTPM: 107.6
Samples: 4

Max nTPM: 129.4
Min nTPM: 75.1
Sample A Female 108.5
Sample B Female 75.1
Sample C Male 117.2
Sample D Male 129.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 126.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 121.5
Samples: 4

Max nTPM: 126.2
Min nTPM: 112.0
Sample A Male 112.0
Sample B Male 126.1
Sample C Female 121.5
Sample D Female 126.2
Hippocampal formation
nTPM: 126.3
Samples: 4

Max nTPM: 145.5
Min nTPM: 117.2
Sample A Male 145.5
Sample B Male 118.9
Sample C Female 123.5
Sample D Female 117.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
69133674 Antisense, RP_050321_02_A07, Mouse strain C57BL/6J (56 days, male) 0.3

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