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  • TISSUE

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  • RRAGA
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:89.9 nTPM
HPA Brain:100.6 nTPM
GTEx:89.9 nTPM
Pig:94.2 nTPM
Mouse:141.6 nTPM
Allen mouse:0.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 100.6
2226 Male, age 75, left hemisphere 127.9
1961 Female, age 42, unknown 73.4
Dorsomedial nucleus
nTPM: 75.9
1989 Male, age 62, unknown 85.7
2041 Female, age 72, unknown 78.4
2017 Female, age 42, unknown 63.6
Lateral hypothalamic area
nTPM: 93.0
1791 Male, age 80, right hemisphere 107.7
2271 Male, age 75, both hemispheres 106.9
2228 Male, age 66, unknown 96.7
2412 Male, age 62, unknown 60.7
Mammillary body
nTPM: 79.8
1923 Female, age 72, unknown 110.4
2413 Male, age 66, unknown 83.9
1945 Male, age 80, right hemisphere 75.4
1948 Female, age 72, unknown 67.2
1834 Female, age 42, unknown 61.9
Paraventricular nucleus
nTPM: 61.4
2700 Male, age 62, unknown 61.4
Preoptic area
nTPM: 76.3
1907 Male, age 80, right hemisphere 91.8
1861 Female, age 42, unknown 68.6
2414 Female, age 72, unknown 68.5
Supraoptic nucleus
nTPM: 82.7
1894 Female, age 72, unknown 100.3
2043 Male, age 62, unknown 81.5
2835 Female, age 72, unknown 66.2
Ventromedial nucleus
nTPM: 76.2
1982 Female, age 72, unknown 81.5
1822 Female, age 42, unknown 70.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

89.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 89.9
Samples: 257

Max nTPM: 147.7
Min nTPM: 49.2
Std nTPM: 19.0
Median nTPM: 90.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 147.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 136.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 133.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 132.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 131.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 129.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 129.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 126.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 126.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 125.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 124.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 123.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 122.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 122.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 122.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 120.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 120.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 118.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 117.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 117.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 117.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 116.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 116.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 115.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 115.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 114.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 114.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 114.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 114.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 113.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 113.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 113.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 113.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 112.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 111.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 111.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 110.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 110.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 109.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 109.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 108.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 108.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 107.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 107.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 107.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 106.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 106.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 106.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 106.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 105.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 105.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 105.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 105.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 105.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 105.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 105.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 105.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 105.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 104.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 104.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 104.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 104.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 103.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 103.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 103.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 103.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 102.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 102.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 102.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 102.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 102.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 101.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 101.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 101.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 101.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 101.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 100.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 100.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 99.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 99.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 99.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 99.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 98.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 98.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 98.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 98.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 97.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 97.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 97.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 97.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 96.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 96.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 96.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 96.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 95.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 95.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 95.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 95.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 95.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 94.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 94.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 94.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 93.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 93.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 93.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 93.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 93.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 92.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 92.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 92.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 92.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 92.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 92.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 92.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 91.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 91.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 91.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 91.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 91.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 91.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 91.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 91.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 91.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 90.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 90.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 90.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 90.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 90.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 90.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 89.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 89.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 88.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 88.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 88.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 88.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 88.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 88.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 87.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 87.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 87.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 87.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 87.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 87.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 86.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 86.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 86.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 86.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 85.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 85.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 85.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 85.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 85.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 84.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 84.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 84.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 84.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 84.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 84.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 83.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 83.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 83.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 83.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 83.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 83.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 82.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 82.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 82.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 82.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 82.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 82.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 82.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 81.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 81.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 81.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 80.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 80.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 80.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 80.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 79.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 79.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 78.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 78.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 78.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 78.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 78.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 77.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 77.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 77.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 77.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 77.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 77.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 76.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 76.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 76.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 75.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 75.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 75.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 74.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 74.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 73.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 73.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 73.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 73.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 73.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 72.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 72.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 72.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 72.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 71.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 70.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 70.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 70.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 70.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 69.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 69.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 69.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 69.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 69.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 68.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 68.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 68.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 67.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 67.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 67.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 67.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 66.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 66.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 66.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 66.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 66.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 65.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 64.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 64.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 63.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 63.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 63.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 62.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 60.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 60.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 60.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 59.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 59.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 59.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 59.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 58.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 58.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 58.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 56.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 55.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 55.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 55.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 53.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 53.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 51.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 51.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 51.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 49.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

94.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 94.2
Samples: 4

Max nTPM: 119.8
Min nTPM: 76.9
Sample A Female 119.8
Sample B Female 89.5
Sample C Male 90.5
Sample D Male 76.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

141.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 141.6
Samples: 4

Max nTPM: 148.4
Min nTPM: 131.1
Sample A Male 140.6
Sample B Male 148.4
Sample C Female 146.4
Sample D Female 131.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.2
69133674 Antisense, RP_050321_02_A07, Mouse strain C57BL/6J (56 days, male) 0.2

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