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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
66.8
nTPM
HPA Brain:
23.1
nTPM
GTEx:
66.8
nTPM
FANTOM5:
200.1
Scaled Tags Per Million
Pig:
204.2
nTPM
Mouse:
21.3
nTPM
Allen mouse:
0.1
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
23.1
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 12.4
1830
Male, age 51, unknown
18.4
2666
Male, age 74, left hemisphere
15.2
2828
Female, age 72, unknown
15.0
1833
Male, age 53, unknown
13.9
2019
Male, age 18, unknown
13.6
1870
Female, age 42, unknown
11.8
1827
Male, age 72, unknown
11.0
2411
Female, age 72, unknown
10.3
2219
Male, age 76, both hemispheres
8.4
2586
Male, age 75, left hemisphere
6.4
Dorsal raphe nucleus nTPM: 15.9
2298
Female, age 72, unknown
19.4
2016
Female, age 72, unknown
17.6
1828
Male, age 53, unknown
15.7
2750
Male, age 76, both hemispheres
14.2
2047
Male, age 72, unknown
12.5
Inferior colliculus nTPM: 13.3
2849
Male, age 72, unknown
15.5
1890
Male, age 53, unknown
13.2
2097
Female, age 72, unknown
12.8
1848
Female, age 42, unknown
11.8
Median raphe nucleus nTPM: 22.2
2220
Male, age 76, midline
22.2
Periaquaductal grey, anterior nTPM: 11.2
1947
Male, age 18, unknown
13.1
1795
Male, age 51, unknown
12.7
2502
Female, age 75, unknown
7.9
Periaquaductal grey, dorsal nTPM: 21.6
2850
Male, age 76, both hemispheres
38.0
1831
Male, age 72, unknown
22.4
1840
Male, age 53, unknown
13.5
2464
Female, age 72, unknown
12.3
Periaquaductal grey, lateral nTPM: 23.1
2272
Male, age 74, both hemispheres
26.9
2140
Male, age 76, both hemispheres
25.7
2053
Male, age 18, unknown
16.6
Pretectal area nTPM: 15.2
2224
Female, age 72, unknown
21.2
2273
Male, age 74, both hemispheres
19.3
2407
Male, age 75, both hemispheres
17.6
1944
Female, age 72, unknown
17.0
1817
Female, age 42, unknown
15.8
2316
Male, age 76, right hemisphere
15.1
2007
Male, age 72, unknown
14.8
1815
Male, age 53, unknown
13.9
2667
Female, age 75, unknown
12.1
2825
Male, age 18, unknown
11.9
1816
Male, age 51, unknown
9.2
Red nucleus nTPM: 16.0
2725
Female, age 75, unknown
26.6
1865
Male, age 51, unknown
22.6
2503
Female, age 72, unknown
20.3
2823
Male, age 76, right hemisphere
18.3
2785
Male, age 18, unknown
16.2
1904
Male, age 53, unknown
16.1
2769
Male, age 72, unknown
14.0
1821
Female, age 72, unknown
13.7
2227
Male, age 72, unknown
13.0
2584
Male, age 75, left hemisphere
12.5
1954
Female, age 42, unknown
11.9
2588
Male, age 74, left hemisphere
7.2
Substantia nigra nTPM: 20.5
2699
Male, age 18, unknown
30.9
2665
Male, age 74, both hemispheres
28.9
2590
Female, age 75, unknown
27.8
1941
Male, age 53, unknown
19.4
1851
Male, age 51, unknown
18.4
2241
Male, age 72, unknown
17.8
2409
Female, age 72, unknown
17.4
2583
Male, age 75, right hemisphere
17.4
1916
Female, age 42, unknown
16.0
1889
Female, age 72, unknown
10.8
Superior colliculus nTPM: 15.8
1913
Female, age 42, unknown
30.2
2587
Male, age 74, left hemisphere
26.3
1995
Male, age 72, unknown
21.1
2087
Female, age 72, unknown
13.8
1796
Male, age 53, unknown
13.0
1895
Male, age 76, right hemisphere
11.6
1839
Male, age 51, unknown
11.4
2261
Male, age 18, unknown
10.8
2664
Male, age 75, both hemispheres
10.3
2668
Female, age 75, unknown
9.8
Ventral tegmental area nTPM: 22.1
2021
Male, age 53, unknown
30.6
2218
Male, age 76, both hemispheres
27.5
1915
Female, age 42, unknown
21.2
2223
Female, age 72, unknown
18.6
1942
Male, age 51, unknown
18.0
2410
Female, age 72, unknown
16.8
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
66.8
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 66.8
Samples: 139
Max nTPM: 271.5
Min nTPM: 4.4
Std nTPM: 56.6
Median nTPM: 47.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
271.5
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
239.1
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
237.2
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
227.7
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
220.7
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
220.4
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
219.3
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
206.4
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
200.5
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
167.1
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
165.5
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
163.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
147.1
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
141.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
135.2
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
133.9
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
129.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
128.7
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
126.1
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
124.1
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
119.8
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
116.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
114.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
107.4
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
107.1
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
103.5
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
102.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
101.7
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
98.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
97.9
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
97.0
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
94.4
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
90.8
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
89.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
86.3
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
85.4
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
84.7
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
84.2
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
84.0
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
83.7
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
82.3
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
82.3
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
78.5
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
74.4
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
72.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
72.6
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
71.2
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
70.6
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
70.3
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
69.7
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
68.1
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
67.2
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
67.1
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
66.7
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
65.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
63.9
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
63.8
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
62.2
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
61.7
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
59.4
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
58.9
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
56.7
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
55.9
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
55.7
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
52.9
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
52.2
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
50.1
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
50.0
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
48.5
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
47.5
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
47.1
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
47.1
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
46.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
46.4
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
45.5
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
44.6
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
44.1
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
44.0
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
43.8
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
42.0
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
39.9
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
38.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
38.0
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
36.8
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
36.4
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
35.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
34.6
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
33.8
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
33.2
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
32.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
32.7
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
32.2
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
31.9
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
29.9
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
29.5
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
29.4
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
29.2
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
29.1
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
28.8
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
28.6
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
27.8
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
27.5
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
26.8
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
25.7
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
25.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
25.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
24.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
24.7
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
23.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
23.1
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
23.0
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
22.4
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
21.5
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
21.4
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
21.3
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
20.8
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
20.2
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
20.1
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
20.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
18.5
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
18.5
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
18.3
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
17.1
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
16.9
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
16.1
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
15.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
15.7
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
14.4
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
12.8
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
12.5
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
12.5
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
10.6
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
10.5
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
9.4
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
8.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
8.0
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
7.7
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
7.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
4.4
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
21.3
Mouse sample
Sample description
nTPM
Midbrain nTPM: 21.4
Samples: 4
Max nTPM: 24.8
Min nTPM: 18.9
Sample A
Male
24.8
Sample B
Male
18.9
Sample C
Female
19.7
Sample D
Female
22.0
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.