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  • TISSUE

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  • CSRP1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:385.8 nTPM
HPA Brain:664.0 nTPM
GTEx:385.8 nTPM
Pig:368.8 nTPM
Mouse:323.3 nTPM
Allen mouse:4.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

664.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 147.5
1961 Female, age 42, unknown 153.4
2226 Male, age 75, left hemisphere 141.5
Dorsomedial nucleus
nTPM: 420.4
1989 Male, age 62, unknown 538.0
2017 Female, age 42, unknown 416.7
2041 Female, age 72, unknown 306.5
Lateral hypothalamic area
nTPM: 338.1
1791 Male, age 80, right hemisphere 394.8
2228 Male, age 66, unknown 351.9
2412 Male, age 62, unknown 331.0
2271 Male, age 75, both hemispheres 274.8
Mammillary body
nTPM: 664.0
1834 Female, age 42, unknown 786.7
1945 Male, age 80, right hemisphere 725.5
1948 Female, age 72, unknown 639.9
2413 Male, age 66, unknown 595.2
1923 Female, age 72, unknown 572.8
Paraventricular nucleus
nTPM: 430.0
2700 Male, age 62, unknown 430.0
Preoptic area
nTPM: 392.3
2414 Female, age 72, unknown 521.2
1861 Female, age 42, unknown 488.0
1907 Male, age 80, right hemisphere 167.7
Supraoptic nucleus
nTPM: 485.2
2043 Male, age 62, unknown 561.4
1894 Female, age 72, unknown 505.4
2835 Female, age 72, unknown 388.8
Ventromedial nucleus
nTPM: 168.2
1982 Female, age 72, unknown 181.9
1822 Female, age 42, unknown 154.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

385.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 385.8
Samples: 257

Max nTPM: 1196.2
Min nTPM: 65.8
Std nTPM: 184.7
Median nTPM: 335.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 1196.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 1095.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 1007.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 918.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 869.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 852.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 832.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 808.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 780.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 757.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 753.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 741.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 738.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 732.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 726.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 720.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 709.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 695.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 688.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 687.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 684.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 670.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 663.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 643.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 642.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 642.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 638.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 637.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 624.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 623.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 618.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 617.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 601.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 595.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 590.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 586.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 582.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 576.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 576.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 575.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 573.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 570.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 570.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 570.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 566.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 562.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 559.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 558.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 557.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 549.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 549.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 542.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 540.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 534.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 531.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 529.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 512.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 511.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 502.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 502.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 492.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 490.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 488.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 486.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 474.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 465.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 461.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 459.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 456.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 455.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 452.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 452.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 452.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 452.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 452.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 448.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 444.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 443.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 443.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 442.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 438.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 437.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 437.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 436.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 434.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 433.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 429.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 429.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 423.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 423.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 421.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 411.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 411.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 406.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 403.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 402.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 400.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 399.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 391.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 388.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 386.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 384.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 383.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 380.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 379.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 374.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 372.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 372.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 367.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 366.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 366.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 364.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 362.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 360.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 354.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 353.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 353.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 350.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 349.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 348.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 348.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 347.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 345.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 343.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 339.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 339.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 337.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 336.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 335.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 334.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 334.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 333.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 325.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 325.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 323.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 322.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 322.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 321.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 321.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 320.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 319.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 316.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 315.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 314.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 312.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 311.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 310.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 310.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 310.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 310.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 309.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 308.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 307.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 306.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 304.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 304.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 303.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 303.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 300.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 299.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 294.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 294.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 293.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 292.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 291.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 289.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 288.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 286.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 284.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 282.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 282.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 281.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 281.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 280.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 278.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 274.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 271.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 271.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 270.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 268.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 267.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 267.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 266.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 266.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 265.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 264.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 264.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 264.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 263.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 259.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 257.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 256.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 256.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 254.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 253.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 252.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 252.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 251.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 249.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 249.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 248.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 248.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 247.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 245.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 243.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 243.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 238.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 238.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 232.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 228.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 226.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 217.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 217.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 216.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 216.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 215.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 214.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 214.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 213.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 210.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 210.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 209.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 208.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 206.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 204.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 201.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 199.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 198.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 198.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 194.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 193.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 191.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 191.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 190.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 190.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 184.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 184.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 181.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 179.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 177.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 175.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 175.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 174.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 169.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 162.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 162.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 160.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 159.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 155.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 144.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 143.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 139.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 136.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 134.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 120.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 116.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 65.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

368.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 368.8
Samples: 4

Max nTPM: 471.3
Min nTPM: 187.2
Sample A Female 444.6
Sample B Female 471.3
Sample C Male 372.2
Sample D Male 187.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

323.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 323.3
Samples: 4

Max nTPM: 345.3
Min nTPM: 284.3
Sample A Male 284.3
Sample B Male 345.3
Sample C Female 335.2
Sample D Female 328.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.6
68269598 Antisense, RP_041129_01_H05, Mouse strain C57BL/6J (56 days, male) 5.5
2130 Antisense, RP_Baylor_102712, Mouse strain C57BL/6J (56 days, male) 3.8
2129 Antisense, RP_Baylor_102712, Mouse strain C57BL/6J (56 days, male) 3.6

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