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  • PSMD4
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:151.7 nTPM
HPA Brain:98.8 nTPM
GTEx:151.7 nTPM
Pig:92.1 nTPM
Mouse:129.1 nTPM
Allen mouse:6.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

98.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 80.6
2226 Male, age 75, left hemisphere 87.4
1961 Female, age 42, unknown 73.8
Dorsomedial nucleus
nTPM: 80.1
2041 Female, age 72, unknown 85.6
1989 Male, age 62, unknown 80.8
2017 Female, age 42, unknown 74.0
Lateral hypothalamic area
nTPM: 98.8
1791 Male, age 80, right hemisphere 105.4
2228 Male, age 66, unknown 104.7
2271 Male, age 75, both hemispheres 98.2
2412 Male, age 62, unknown 86.9
Mammillary body
nTPM: 93.5
1923 Female, age 72, unknown 106.2
1948 Female, age 72, unknown 100.2
1945 Male, age 80, right hemisphere 90.6
2413 Male, age 66, unknown 90.3
1834 Female, age 42, unknown 80.0
Paraventricular nucleus
nTPM: 83.4
2700 Male, age 62, unknown 83.4
Preoptic area
nTPM: 87.0
1861 Female, age 42, unknown 88.7
1907 Male, age 80, right hemisphere 88.2
2414 Female, age 72, unknown 84.1
Supraoptic nucleus
nTPM: 84.7
2835 Female, age 72, unknown 88.7
1894 Female, age 72, unknown 82.7
2043 Male, age 62, unknown 82.7
Ventromedial nucleus
nTPM: 83.1
1982 Female, age 72, unknown 92.1
1822 Female, age 42, unknown 74.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

151.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 151.7
Samples: 257

Max nTPM: 279.3
Min nTPM: 75.9
Std nTPM: 35.5
Median nTPM: 147.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 279.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 273.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 272.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 246.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 245.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 233.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 227.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 224.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 223.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 222.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 220.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 218.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 218.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 211.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 211.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 210.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 208.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 207.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 206.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 206.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 206.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 203.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 202.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 200.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 199.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 198.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 198.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 196.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 195.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 194.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 193.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 193.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 192.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 192.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 192.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 190.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 189.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 189.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 188.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 188.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 186.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 186.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 185.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 185.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 184.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 184.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 183.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 182.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 182.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 181.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 181.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 181.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 180.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 179.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 179.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 178.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 178.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 177.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 176.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 176.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 175.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 175.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 174.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 174.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 173.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 172.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 171.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 171.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 170.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 170.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 170.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 170.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 169.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 169.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 168.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 167.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 166.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 166.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 166.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 165.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 164.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 164.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 163.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 163.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 163.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 161.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 161.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 161.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 160.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 160.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 160.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 159.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 158.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 158.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 158.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 157.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 157.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 157.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 156.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 156.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 156.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 156.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 155.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 155.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 155.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 155.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 155.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 155.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 154.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 153.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 152.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 152.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 151.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 151.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 151.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 150.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 150.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 150.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 150.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 149.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 149.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 148.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 148.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 148.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 148.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 148.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 148.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 147.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 147.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 147.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 147.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 145.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 144.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 144.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 144.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 144.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 144.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 144.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 143.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 143.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 142.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 142.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 142.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 141.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 141.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 141.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 140.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 140.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 140.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 139.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 139.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 138.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 138.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 138.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 137.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 137.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 137.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 137.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 136.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 135.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 135.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 135.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 134.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 134.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 134.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 134.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 134.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 133.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 133.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 133.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 132.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 132.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 132.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 131.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 131.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 131.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 131.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 131.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 130.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 130.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 130.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 129.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 129.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 129.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 129.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 129.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 128.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 128.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 128.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 128.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 127.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 126.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 126.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 125.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 125.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 125.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 125.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 125.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 125.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 125.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 124.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 124.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 124.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 122.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 122.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 121.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 121.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 121.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 121.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 121.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 120.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 120.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 120.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 119.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 119.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 119.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 118.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 117.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 117.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 117.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 117.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 117.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 116.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 116.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 116.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 115.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 115.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 115.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 115.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 115.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 114.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 114.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 113.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 111.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 110.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 110.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 108.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 106.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 106.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 106.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 106.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 105.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 103.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 102.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 100.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 100.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 98.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 98.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 98.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 95.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 91.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 88.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 85.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 82.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 79.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 77.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 75.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

92.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 92.1
Samples: 4

Max nTPM: 117.1
Min nTPM: 68.2
Sample A Female 117.1
Sample B Female 92.9
Sample C Male 90.1
Sample D Male 68.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

129.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 129.1
Samples: 4

Max nTPM: 134.6
Min nTPM: 124.1
Sample A Male 129.1
Sample B Male 134.6
Sample C Female 128.5
Sample D Female 124.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 6.0
2503 Antisense, RP_040407_02_H10, Mouse strain C57BL/6J (56 days, male) 6.0
2504 Antisense, RP_040407_02_H10, Mouse strain C57BL/6J (56 days, male) 3.8

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