HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:176.4 nTPM
HPA Brain:95.3 nTPM
GTEx:176.4 nTPM
FANTOM5:87.7 Scaled Tags Per Million
Pig:100.3 nTPM
Mouse:136.0 nTPM
Allen mouse:11.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006700
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 95.3
Sample id Sample description nTPM
Hippocampus
nTPM: 83.3
1898 Male, age 80, left hemisphere 117.0
2529 Female, age 94, left hemisphere 83.5
1855 Male, age 76, left hemisphere 81.4
2621 Female, age 67, right hemisphere 78.9
1911 Female, age 85, right hemisphere 71.1
2148 Female, age 91, left hemisphere 67.7
Dentate gyrus
nTPM: 83.0
2530 Female, age 94, left hemisphere 96.5
2010 Male, age 76, both hemispheres 96.1
1927 Female, age 91, both hemispheres 90.7
2528 Male, age 74, both hemispheres 84.5
2246 Female, age 85, both hemispheres 67.3
2531 Female, age 67, both hemispheres 63.1
Entorhinal gyrus
nTPM: 80.9
2764 Male, age 80, right hemisphere 96.1
1938 Female, age 85, left hemisphere 95.7
2117 Female, age 91, right hemisphere 85.0
1787 Male, age 76, left hemisphere 84.3
2613 Female, age 94, left hemisphere 65.7
2686 Male, age 75, right hemisphere 58.4
Hippocampus, CA1
nTPM: 92.5
2749 Male, age 80, left hemisphere 142.7
2527 Male, age 74, both hemispheres 85.6
1873 Female, age 85, both hemispheres 84.4
2045 Male, age 76, both hemispheres 79.1
2082 Female, age 91, right hemisphere 70.9
Hippocampus, CA2
nTPM: 92.7
1892 Male, age 76, both hemispheres 110.5
1963 Male, age 80, left hemisphere 108.0
2249 Male, age 74, both hemispheres 103.4
2437 Female, age 94, left hemisphere 82.4
1940 Female, age 85, left hemisphere 80.8
2113 Female, age 91, right hemisphere 71.3
Hippocampus, CA3
nTPM: 85.3
2137 Male, age 80, left hemisphere 107.3
1867 Male, age 76, both hemispheres 104.1
2436 Male, age 74, both hemispheres 101.3
1891 Female, age 85, both hemispheres 77.2
2620 Female, age 94, left hemisphere 65.6
2861 Female, age 67, both hemispheres 56.3
Parahippocampal cortex
nTPM: 76.4
1850 Male, age 80, both hemispheres 99.0
1990 Female, age 91, right hemisphere 95.2
1933 Female, age 85, both hemispheres 87.2
2250 Female, age 67, right hemisphere 82.4
2018 Male, age 76, both hemispheres 77.7
2532 Female, age 72, left hemisphere 75.3
2245 Female, age 91, both hemispheres 74.7
2693 Female, age 94, both hemispheres 63.6
2692 Male, age 74, both hemispheres 59.5
2622 Female, age 67, right hemisphere 49.4
Perirhinal gyrus
nTPM: 95.3
1847 Female, age 91, left hemisphere 119.5
1794 Male, age 80, right hemisphere 106.8
1841 Female, age 85, right hemisphere 91.1
2521 Female, age 94, right hemisphere 84.3
2848 Male, age 76, right hemisphere 74.5
Subiculum
nTPM: 80.2
1901 Male, age 80, both hemispheres 93.5
1977 Female, age 85, both hemispheres 92.9
2042 Male, age 76, both hemispheres 78.7
2438 Female, age 94, left hemisphere 73.8
2619 Male, age 74, both hemispheres 73.5
2729 Female, age 91, right hemisphere 68.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 176.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 176.4
Samples: 255

Max nTPM: 331.7
Min nTPM: 104.7
Std nTPM: 35.2
Median nTPM: 172.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 331.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 298.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 288.1
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 268.7
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 265.1
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 263.6
GTEX-11H98-0011-R1a-SM-GIN8O 50-59 years, male 259.2
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 258.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 253.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 253.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 252.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 87.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 87.7
FF:10169-103B7 60 years, female 112.1
FF:10153-102I9 76 years, female 63.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 100.3
Pig sample Sample description nTPM
Subiculum
nTPM: 78.1
Samples: 4

Max nTPM: 104.3
Min nTPM: 65.4
Sample A Female 104.3
Sample B Female 74.3
Sample C Male 68.5
Sample D Male 65.4
Dorsal hippocampus
nTPM: 100.4
Samples: 4

Max nTPM: 139.8
Min nTPM: 70.9
Sample A Female 139.8
Sample B Female 100.6
Sample C Male 90.1
Sample D Male 70.9
Entorhinal cortex
nTPM: 72.7
Samples: 4

Max nTPM: 90.9
Min nTPM: 52.5
Sample A Female 76.1
Sample B Female 90.9
Sample C Male 71.2
Sample D Male 52.5
Ventral hippocampus
nTPM: 92.3
Samples: 4

Max nTPM: 103.8
Min nTPM: 68.2
Sample A Female 103.8
Sample B Female 68.2
Sample C Male 101.0
Sample D Male 96.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 136.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 126.4
Samples: 4

Max nTPM: 133.5
Min nTPM: 118.6
Sample A Male 118.6
Sample B Male 128.2
Sample C Female 133.5
Sample D Female 125.4
Hippocampal formation
nTPM: 136.0
Samples: 4

Max nTPM: 145.8
Min nTPM: 123.8
Sample A Male 145.8
Sample B Male 123.8
Sample C Female 133.0
Sample D Female 141.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 11.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.4
68196974 Antisense, RP_040928_01_A04, Mouse strain C57BL/6J (56 days, male) 11.4

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