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  • TISSUE

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  • PSMB4
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:199.9 nTPM
HPA Brain:121.7 nTPM
GTEx:199.9 nTPM
Pig:98.9 nTPM
Mouse:141.2 nTPM
Allen mouse:8.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

121.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 113.8
2226 Male, age 75, left hemisphere 136.4
1961 Female, age 42, unknown 91.1
Dorsomedial nucleus
nTPM: 91.6
2041 Female, age 72, unknown 99.5
1989 Male, age 62, unknown 96.1
2017 Female, age 42, unknown 79.4
Lateral hypothalamic area
nTPM: 121.7
1791 Male, age 80, right hemisphere 143.0
2271 Male, age 75, both hemispheres 133.0
2228 Male, age 66, unknown 126.5
2412 Male, age 62, unknown 84.1
Mammillary body
nTPM: 119.5
1923 Female, age 72, unknown 174.7
2413 Male, age 66, unknown 119.3
1948 Female, age 72, unknown 111.7
1945 Male, age 80, right hemisphere 101.5
1834 Female, age 42, unknown 90.2
Paraventricular nucleus
nTPM: 85.4
2700 Male, age 62, unknown 85.4
Preoptic area
nTPM: 98.8
1907 Male, age 80, right hemisphere 117.4
1861 Female, age 42, unknown 91.9
2414 Female, age 72, unknown 87.2
Supraoptic nucleus
nTPM: 118.4
1894 Female, age 72, unknown 142.6
2043 Male, age 62, unknown 111.7
2835 Female, age 72, unknown 101.1
Ventromedial nucleus
nTPM: 92.4
1982 Female, age 72, unknown 103.3
1822 Female, age 42, unknown 81.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

199.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 199.9
Samples: 257

Max nTPM: 361.7
Min nTPM: 123.6
Std nTPM: 39.4
Median nTPM: 197.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 361.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 336.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 334.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 311.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 298.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 288.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 282.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 281.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 280.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 276.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 276.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 275.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 272.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 269.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 269.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 268.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 265.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 262.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 262.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 257.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 257.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 255.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 252.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 250.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 249.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 247.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 246.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 245.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 244.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 244.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 244.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 244.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 242.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 242.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 241.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 241.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 239.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 238.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 237.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 237.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 236.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 236.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 233.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 233.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 233.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 232.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 232.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 231.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 231.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 229.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 228.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 228.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 227.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 227.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 226.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 224.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 224.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 224.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 224.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 223.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 222.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 222.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 221.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 221.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 220.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 220.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 219.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 219.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 218.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 218.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 218.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 218.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 217.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 217.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 216.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 216.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 216.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 216.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 216.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 215.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 215.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 214.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 213.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 213.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 213.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 212.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 211.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 211.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 211.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 210.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 210.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 210.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 209.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 208.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 208.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 208.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 207.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 207.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 207.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 206.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 206.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 206.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 206.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 206.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 206.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 206.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 205.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 203.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 203.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 203.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 203.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 203.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 203.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 202.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 202.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 201.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 201.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 201.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 201.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 201.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 201.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 201.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 200.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 200.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 200.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 199.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 198.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 197.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 197.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 197.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 196.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 196.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 196.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 195.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 195.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 195.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 194.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 194.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 194.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 193.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 193.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 192.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 192.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 192.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 191.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 191.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 190.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 190.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 190.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 190.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 189.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 188.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 188.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 187.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 187.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 187.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 186.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 185.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 185.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 184.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 184.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 184.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 183.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 183.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 183.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 183.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 182.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 182.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 182.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 181.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 181.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 181.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 181.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 181.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 180.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 180.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 179.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 179.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 179.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 179.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 178.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 178.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 177.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 177.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 177.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 176.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 176.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 176.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 176.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 173.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 172.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 172.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 171.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 171.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 171.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 170.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 170.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 170.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 170.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 169.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 169.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 168.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 168.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 168.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 167.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 167.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 166.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 165.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 165.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 165.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 164.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 164.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 163.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 163.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 163.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 163.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 162.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 161.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 161.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 160.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 159.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 158.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 157.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 156.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 155.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 154.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 154.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 153.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 153.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 153.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 152.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 151.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 151.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 150.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 150.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 148.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 147.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 146.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 145.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 144.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 142.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 142.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 141.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 141.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 141.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 140.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 139.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 139.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 137.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 134.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 132.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 130.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 129.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 128.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 126.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 125.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 123.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

98.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 98.9
Samples: 4

Max nTPM: 132.5
Min nTPM: 73.0
Sample A Female 132.5
Sample B Female 98.9
Sample C Male 91.1
Sample D Male 73.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

141.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 141.2
Samples: 4

Max nTPM: 157.1
Min nTPM: 127.2
Sample A Male 140.5
Sample B Male 157.1
Sample C Female 139.9
Sample D Female 127.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 8.8
68196974 Antisense, RP_040928_01_A04, Mouse strain C57BL/6J (56 days, male) 8.8

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