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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:220.5 nTPM
HPA Brain:85.9 nTPM
GTEx:220.5 nTPM
Pig:114.5 nTPM
Mouse:81.4 nTPM
Allen mouse:0.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

85.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 63.1
2226 Male, age 75, left hemisphere 66.5
1961 Female, age 42, unknown 59.8
Dorsomedial nucleus
nTPM: 60.5
2041 Female, age 72, unknown 69.0
1989 Male, age 62, unknown 65.3
2017 Female, age 42, unknown 47.2
Lateral hypothalamic area
nTPM: 69.2
2228 Male, age 66, unknown 82.2
1791 Male, age 80, right hemisphere 72.7
2271 Male, age 75, both hemispheres 64.8
2412 Male, age 62, unknown 57.3
Mammillary body
nTPM: 74.8
1923 Female, age 72, unknown 84.7
2413 Male, age 66, unknown 81.7
1948 Female, age 72, unknown 72.7
1945 Male, age 80, right hemisphere 67.5
1834 Female, age 42, unknown 67.2
Paraventricular nucleus
nTPM: 54.2
2700 Male, age 62, unknown 54.2
Preoptic area
nTPM: 61.5
1861 Female, age 42, unknown 66.5
1907 Male, age 80, right hemisphere 61.3
2414 Female, age 72, unknown 56.6
Supraoptic nucleus
nTPM: 85.9
1894 Female, age 72, unknown 102.6
2043 Male, age 62, unknown 87.3
2835 Female, age 72, unknown 67.9
Ventromedial nucleus
nTPM: 63.3
1982 Female, age 72, unknown 69.4
1822 Female, age 42, unknown 57.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

220.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 220.5
Samples: 257

Max nTPM: 444.6
Min nTPM: 100.6
Std nTPM: 48.8
Median nTPM: 212.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 444.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 367.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 358.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 353.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 346.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 342.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 334.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 328.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 326.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 325.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 320.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 317.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 317.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 314.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 314.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 313.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 305.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 303.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 299.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 298.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 295.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 294.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 294.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 290.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 290.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 289.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 285.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 282.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 281.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 279.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 277.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 275.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 274.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 273.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 272.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 269.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 268.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 265.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 262.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 261.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 261.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 261.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 260.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 260.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 260.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 260.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 259.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 259.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 258.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 256.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 256.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 255.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 255.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 251.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 248.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 248.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 248.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 247.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 246.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 246.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 245.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 244.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 243.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 243.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 241.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 240.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 240.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 240.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 239.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 239.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 239.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 239.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 239.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 238.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 238.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 238.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 238.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 238.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 238.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 237.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 236.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 236.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 236.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 236.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 236.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 233.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 233.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 232.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 232.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 231.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 231.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 230.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 230.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 230.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 230.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 229.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 229.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 229.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 228.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 228.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 228.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 227.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 226.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 224.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 224.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 223.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 223.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 222.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 221.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 221.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 220.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 220.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 220.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 219.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 219.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 217.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 217.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 217.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 217.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 216.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 216.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 215.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 215.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 215.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 214.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 213.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 213.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 212.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 212.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 212.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 211.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 211.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 210.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 210.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 210.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 209.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 209.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 209.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 209.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 209.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 208.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 208.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 207.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 207.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 206.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 206.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 206.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 205.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 205.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 205.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 205.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 204.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 204.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 204.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 204.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 204.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 204.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 204.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 204.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 203.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 203.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 203.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 202.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 201.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 201.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 201.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 199.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 199.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 199.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 198.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 198.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 197.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 197.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 197.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 196.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 196.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 196.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 195.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 194.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 194.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 194.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 193.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 193.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 193.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 192.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 191.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 191.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 191.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 191.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 191.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 190.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 190.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 189.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 188.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 187.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 187.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 186.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 186.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 186.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 185.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 185.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 185.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 185.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 184.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 183.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 183.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 183.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 182.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 182.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 182.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 180.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 180.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 179.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 179.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 177.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 177.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 177.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 177.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 175.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 174.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 173.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 171.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 170.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 170.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 170.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 170.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 169.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 168.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 168.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 167.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 167.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 165.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 165.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 164.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 163.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 161.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 160.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 159.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 158.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 156.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 156.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 156.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 155.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 155.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 153.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 150.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 149.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 147.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 145.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 144.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 142.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 138.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 134.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 129.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 127.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 102.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 100.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

114.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 114.5
Samples: 4

Max nTPM: 150.9
Min nTPM: 97.5
Sample A Female 150.9
Sample B Female 108.7
Sample C Male 101.0
Sample D Male 97.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

81.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 81.4
Samples: 4

Max nTPM: 85.4
Min nTPM: 74.7
Sample A Male 74.7
Sample B Male 85.2
Sample C Female 85.4
Sample D Female 80.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.4
1344 Antisense, RP_Baylor_102713, Mouse strain C57BL/6J (56 days, male) 0.4
1343 Antisense, RP_Baylor_102713, Mouse strain C57BL/6J (56 days, male) 0.1

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