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ST6GALNAC6
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  • SUMMARY

  • TISSUE

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  • ST6GALNAC6
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:62.9 nTPM
HPA Brain:71.2 nTPM
GTEx:62.9 nTPM
Pig:22.3 nTPM
Mouse:62.7 nTPM
Allen mouse:0.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 57.3
1961 Female, age 42, unknown 63.4
2226 Male, age 75, left hemisphere 51.3
Dorsomedial nucleus
nTPM: 60.7
1989 Male, age 62, unknown 71.9
2017 Female, age 42, unknown 56.4
2041 Female, age 72, unknown 53.8
Lateral hypothalamic area
nTPM: 61.1
1791 Male, age 80, right hemisphere 75.5
2412 Male, age 62, unknown 69.8
2271 Male, age 75, both hemispheres 61.1
2228 Male, age 66, unknown 38.0
Mammillary body
nTPM: 46.4
2413 Male, age 66, unknown 50.1
1945 Male, age 80, right hemisphere 46.6
1948 Female, age 72, unknown 46.6
1923 Female, age 72, unknown 44.7
1834 Female, age 42, unknown 44.2
Paraventricular nucleus
nTPM: 45.0
2700 Male, age 62, unknown 45.0
Preoptic area
nTPM: 60.9
1861 Female, age 42, unknown 69.8
1907 Male, age 80, right hemisphere 61.3
2414 Female, age 72, unknown 51.7
Supraoptic nucleus
nTPM: 55.7
2835 Female, age 72, unknown 68.7
1894 Female, age 72, unknown 50.9
2043 Male, age 62, unknown 47.6
Ventromedial nucleus
nTPM: 71.2
1982 Female, age 72, unknown 76.6
1822 Female, age 42, unknown 65.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

62.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 62.9
Samples: 257

Max nTPM: 192.9
Min nTPM: 29.3
Std nTPM: 21.9
Median nTPM: 58.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 192.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 180.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 170.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 159.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 146.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 120.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 109.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 104.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 103.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 102.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 98.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 96.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 94.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 93.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 93.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 92.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 91.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 89.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 88.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 87.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 87.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 87.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 87.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 85.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 85.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 85.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 84.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 83.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 83.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 81.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 81.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 81.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 81.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 81.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 81.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 81.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 80.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 77.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 77.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 77.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 77.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 76.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 76.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 76.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 76.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 76.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 75.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 75.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 75.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 75.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 74.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 74.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 74.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 74.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 73.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 73.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 73.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 73.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 73.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 72.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 72.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 72.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 72.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 72.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 72.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 71.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 71.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 71.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 71.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 71.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 70.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 70.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 70.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 69.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 69.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 69.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 69.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 69.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 68.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 68.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 68.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 67.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 67.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 67.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 67.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 67.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 66.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 66.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 66.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 66.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 66.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 65.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 65.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 65.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 64.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 64.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 64.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 64.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 64.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 64.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 64.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 63.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 63.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 62.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 62.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 62.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 62.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 60.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 60.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 60.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 60.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 60.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 60.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 60.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 60.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 59.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 59.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 59.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 59.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 59.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 59.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 59.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 59.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 59.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 59.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 59.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 59.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 58.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 58.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 58.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 58.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 58.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 58.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 58.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 57.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 57.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 57.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 57.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 57.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 57.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 57.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 57.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 57.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 56.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 56.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 56.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 56.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 56.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 55.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 55.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 55.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 55.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 55.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 55.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 54.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 54.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 54.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 54.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 54.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 54.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 54.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 54.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 53.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 53.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 53.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 53.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 53.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 53.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 53.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 53.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 53.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 52.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 52.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 52.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 52.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 52.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 52.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 52.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 51.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 51.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 51.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 51.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 51.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 51.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 51.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 51.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 51.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 50.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 50.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 50.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 50.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 50.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 50.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 50.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 50.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 49.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 49.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 49.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 49.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 48.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 48.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 48.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 48.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 47.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 47.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 47.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 47.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 47.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 47.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 46.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 46.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 46.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 46.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 46.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 45.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 45.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 45.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 45.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 45.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 45.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 45.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 44.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 44.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 44.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 44.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 44.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 44.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 44.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 43.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 43.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 43.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 42.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 42.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 42.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 42.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 41.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 41.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 41.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 41.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 40.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 40.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 38.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 38.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 37.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 35.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 35.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 34.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 34.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 34.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 33.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 32.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 32.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 32.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 31.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 30.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 29.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 29.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 22.3
Samples: 4

Max nTPM: 27.7
Min nTPM: 17.4
Sample A Female 27.7
Sample B Female 20.9
Sample C Male 23.2
Sample D Male 17.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

62.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 62.7
Samples: 4

Max nTPM: 67.4
Min nTPM: 60.7
Sample A Male 61.2
Sample B Male 67.4
Sample C Female 60.7
Sample D Female 61.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.2
385995 Antisense, RP_040625_01_G03, Mouse strain C57BL/6J (56 days, male) 0.4
74047902 Antisense, RP_051214_02_B12, Mouse strain C57BL/6J (56 days, male) 0.3
74822602 Antisense, RP_060321_02_H01, Mouse strain C57BL/6J (56 days, male) 0.1

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