HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:150.4 nTPM
HPA Brain:261.1 nTPM
GTEx:150.4 nTPM
FANTOM5:48.3 Scaled Tags Per Million
Pig:167.1 nTPM
Mouse:252.6 nTPM
Allen mouse:8.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA061719
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 261.1
Sample id Sample description nTPM
Hippocampus
nTPM: 261.1
2621 Female, age 67, right hemisphere 326.6
2148 Female, age 91, left hemisphere 273.0
2529 Female, age 94, left hemisphere 264.1
1898 Male, age 80, left hemisphere 236.0
1911 Female, age 85, right hemisphere 233.8
1855 Male, age 76, left hemisphere 232.9
Dentate gyrus
nTPM: 241.1
2530 Female, age 94, left hemisphere 304.9
1927 Female, age 91, both hemispheres 293.8
2531 Female, age 67, both hemispheres 253.9
2010 Male, age 76, both hemispheres 211.9
2528 Male, age 74, both hemispheres 192.0
2246 Female, age 85, both hemispheres 190.4
Entorhinal gyrus
nTPM: 233.0
2613 Female, age 94, left hemisphere 332.0
2686 Male, age 75, right hemisphere 251.8
2764 Male, age 80, right hemisphere 243.2
1787 Male, age 76, left hemisphere 213.6
1938 Female, age 85, left hemisphere 186.5
2117 Female, age 91, right hemisphere 170.9
Hippocampus, CA1
nTPM: 235.4
2749 Male, age 80, left hemisphere 325.7
2527 Male, age 74, both hemispheres 257.3
1873 Female, age 85, both hemispheres 243.5
2082 Female, age 91, right hemisphere 178.6
2045 Male, age 76, both hemispheres 171.9
Hippocampus, CA2
nTPM: 255.4
1963 Male, age 80, left hemisphere 470.1
2437 Female, age 94, left hemisphere 286.0
1892 Male, age 76, both hemispheres 232.0
2113 Female, age 91, right hemisphere 209.1
2249 Male, age 74, both hemispheres 186.8
1940 Female, age 85, left hemisphere 148.6
Hippocampus, CA3
nTPM: 242.2
2861 Female, age 67, both hemispheres 319.9
2137 Male, age 80, left hemisphere 306.2
2620 Female, age 94, left hemisphere 236.7
1867 Male, age 76, both hemispheres 207.0
1891 Female, age 85, both hemispheres 202.9
2436 Male, age 74, both hemispheres 180.3
Parahippocampal cortex
nTPM: 224.3
2245 Female, age 91, both hemispheres 275.2
2622 Female, age 67, right hemisphere 268.0
1990 Female, age 91, right hemisphere 234.2
2693 Female, age 94, both hemispheres 226.1
1850 Male, age 80, both hemispheres 216.1
2532 Female, age 72, left hemisphere 214.3
2250 Female, age 67, right hemisphere 213.2
2692 Male, age 74, both hemispheres 210.9
1933 Female, age 85, both hemispheres 198.8
2018 Male, age 76, both hemispheres 186.1
Perirhinal gyrus
nTPM: 214.0
1847 Female, age 91, left hemisphere 248.3
1794 Male, age 80, right hemisphere 227.8
2521 Female, age 94, right hemisphere 220.3
1841 Female, age 85, right hemisphere 192.9
2848 Male, age 76, right hemisphere 180.8
Subiculum
nTPM: 210.6
2438 Female, age 94, left hemisphere 245.0
1901 Male, age 80, both hemispheres 224.9
2619 Male, age 74, both hemispheres 215.7
2042 Male, age 76, both hemispheres 208.8
1977 Female, age 85, both hemispheres 192.3
2729 Female, age 91, right hemisphere 176.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 150.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 150.4
Samples: 255

Max nTPM: 426.4
Min nTPM: 38.3
Std nTPM: 58.5
Median nTPM: 144.9
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 426.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 354.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 341.5
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 332.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 299.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 286.8
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 277.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 257.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 255.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 254.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 252.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 48.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.3
FF:10169-103B7 60 years, female 48.8
FF:10153-102I9 76 years, female 47.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 167.1
Pig sample Sample description nTPM
Subiculum
nTPM: 124.0
Samples: 4

Max nTPM: 172.5
Min nTPM: 93.7
Sample A Female 172.5
Sample B Female 115.5
Sample C Male 114.4
Sample D Male 93.7
Dorsal hippocampus
nTPM: 119.7
Samples: 4

Max nTPM: 138.7
Min nTPM: 89.2
Sample A Female 138.7
Sample B Female 119.0
Sample C Male 131.8
Sample D Male 89.2
Entorhinal cortex
nTPM: 167.1
Samples: 4

Max nTPM: 191.9
Min nTPM: 147.9
Sample A Female 154.8
Sample B Female 173.9
Sample C Male 191.9
Sample D Male 147.9
Ventral hippocampus
nTPM: 118.3
Samples: 4

Max nTPM: 152.2
Min nTPM: 94.3
Sample A Female 98.4
Sample B Female 94.3
Sample C Male 152.2
Sample D Male 128.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 252.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 252.6
Samples: 4

Max nTPM: 260.5
Min nTPM: 245.3
Sample A Male 260.5
Sample B Male 249.8
Sample C Female 245.3
Sample D Female 254.8
Hippocampal formation
nTPM: 203.1
Samples: 4

Max nTPM: 238.4
Min nTPM: 178.0
Sample A Male 238.4
Sample B Male 189.4
Sample C Female 178.0
Sample D Female 206.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.2
100144096 Antisense, RP_110407_03_B09, Mouse strain C57BL/6J (56 days, male) 8.2

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