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  • TISSUE

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  • BRSK1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:86.4 nTPM
HPA Brain:184.7 nTPM
GTEx:86.4 nTPM
Pig:69.9 nTPM
Mouse:105.9 nTPM
Allen mouse:5.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

184.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 115.2
2226 Male, age 75, left hemisphere 121.7
1961 Female, age 42, unknown 108.7
Dorsomedial nucleus
nTPM: 135.6
1989 Male, age 62, unknown 177.8
2017 Female, age 42, unknown 127.4
2041 Female, age 72, unknown 101.6
Lateral hypothalamic area
nTPM: 157.6
2228 Male, age 66, unknown 201.9
2412 Male, age 62, unknown 144.5
2271 Male, age 75, both hemispheres 142.7
1791 Male, age 80, right hemisphere 141.3
Mammillary body
nTPM: 184.7
1923 Female, age 72, unknown 233.4
2413 Male, age 66, unknown 214.4
1834 Female, age 42, unknown 170.7
1948 Female, age 72, unknown 169.2
1945 Male, age 80, right hemisphere 135.7
Paraventricular nucleus
nTPM: 121.9
2700 Male, age 62, unknown 121.9
Preoptic area
nTPM: 141.4
1907 Male, age 80, right hemisphere 148.4
1861 Female, age 42, unknown 140.5
2414 Female, age 72, unknown 135.3
Supraoptic nucleus
nTPM: 88.1
2835 Female, age 72, unknown 107.6
2043 Male, age 62, unknown 81.2
1894 Female, age 72, unknown 75.6
Ventromedial nucleus
nTPM: 98.1
1982 Female, age 72, unknown 104.4
1822 Female, age 42, unknown 91.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

86.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 86.4
Samples: 257

Max nTPM: 195.3
Min nTPM: 33.4
Std nTPM: 25.1
Median nTPM: 82.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 195.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 182.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 168.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 161.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 158.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 149.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 148.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 147.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 144.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 138.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 137.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 137.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 134.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 133.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 132.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 131.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 131.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 130.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 130.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 124.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 121.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 120.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 119.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 119.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 118.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 118.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 117.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 116.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 116.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 115.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 114.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 113.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 112.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 111.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 111.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 109.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 109.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 109.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 109.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 108.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 107.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 107.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 106.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 106.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 105.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 104.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 104.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 103.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 103.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 103.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 103.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 103.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 103.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 103.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 102.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 102.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 102.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 102.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 101.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 101.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 101.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 100.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 100.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 100.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 99.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 99.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 99.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 99.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 99.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 98.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 98.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 97.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 97.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 97.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 95.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 95.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 95.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 95.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 95.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 94.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 93.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 93.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 93.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 93.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 93.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 92.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 91.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 91.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 91.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 91.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 91.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 90.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 90.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 90.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 89.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 89.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 89.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 89.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 88.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 88.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 88.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 87.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 87.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 87.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 87.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 86.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 86.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 85.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 85.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 85.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 85.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 85.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 84.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 84.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 84.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 84.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 84.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 84.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 84.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 84.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 84.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 83.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 83.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 83.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 83.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 83.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 82.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 82.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 82.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 82.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 82.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 82.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 82.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 81.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 81.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 81.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 80.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 80.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 80.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 80.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 80.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 80.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 79.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 79.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 78.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 78.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 78.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 78.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 78.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 78.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 77.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 77.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 77.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 77.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 77.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 77.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 76.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 76.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 76.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 76.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 75.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 75.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 75.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 75.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 75.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 75.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 74.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 74.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 74.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 74.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 74.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 73.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 73.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 73.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 73.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 73.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 73.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 73.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 72.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 72.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 72.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 72.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 72.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 71.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 71.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 71.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 71.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 71.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 70.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 70.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 70.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 70.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 70.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 70.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 69.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 69.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 69.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 69.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 69.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 67.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 67.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 67.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 66.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 66.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 66.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 65.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 65.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 65.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 64.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 64.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 64.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 64.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 64.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 64.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 64.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 63.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 63.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 63.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 63.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 62.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 62.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 62.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 60.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 60.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 60.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 60.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 60.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 59.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 59.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 59.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 59.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 59.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 58.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 58.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 58.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 58.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 57.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 57.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 56.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 56.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 55.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 54.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 54.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 54.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 53.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 52.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 52.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 50.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 50.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 50.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 49.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 46.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 46.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 42.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 41.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 34.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 33.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

69.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 69.9
Samples: 4

Max nTPM: 86.3
Min nTPM: 44.6
Sample A Female 86.3
Sample B Female 80.0
Sample C Male 68.7
Sample D Male 44.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

105.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 105.9
Samples: 4

Max nTPM: 110.2
Min nTPM: 103.3
Sample A Male 104.8
Sample B Male 110.2
Sample C Female 105.3
Sample D Female 103.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 5.9
100144096 Antisense, RP_110407_03_B09, Mouse strain C57BL/6J (56 days, male) 5.9

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