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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:35.4 nTPM
HPA Brain:42.0 nTPM
GTEx:35.4 nTPM
Pig:13.5 nTPM
Mouse:8.5 nTPM
Allen mouse:5.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 40.8
1961 Female, age 42, unknown 44.1
2226 Male, age 75, left hemisphere 37.5
Dorsomedial nucleus
nTPM: 42.0
2017 Female, age 42, unknown 47.6
1989 Male, age 62, unknown 42.0
2041 Female, age 72, unknown 36.3
Lateral hypothalamic area
nTPM: 37.6
2412 Male, age 62, unknown 39.3
2271 Male, age 75, both hemispheres 38.0
1791 Male, age 80, right hemisphere 37.6
2228 Male, age 66, unknown 35.6
Mammillary body
nTPM: 39.6
1948 Female, age 72, unknown 44.0
1945 Male, age 80, right hemisphere 39.3
2413 Male, age 66, unknown 39.2
1834 Female, age 42, unknown 38.6
1923 Female, age 72, unknown 36.9
Paraventricular nucleus
nTPM: 38.4
2700 Male, age 62, unknown 38.4
Preoptic area
nTPM: 40.6
2414 Female, age 72, unknown 41.9
1861 Female, age 42, unknown 41.1
1907 Male, age 80, right hemisphere 38.9
Supraoptic nucleus
nTPM: 36.9
2043 Male, age 62, unknown 40.3
1894 Female, age 72, unknown 35.6
2835 Female, age 72, unknown 34.7
Ventromedial nucleus
nTPM: 38.9
1982 Female, age 72, unknown 39.1
1822 Female, age 42, unknown 38.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 35.4
Samples: 257

Max nTPM: 60.0
Min nTPM: 20.0
Std nTPM: 7.6
Median nTPM: 34.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 60.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 57.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 55.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 54.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 54.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 54.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 53.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 53.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 53.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 52.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 52.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 51.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 51.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 51.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 50.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 50.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 49.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 49.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 49.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 48.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 48.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 47.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 47.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 46.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 46.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 46.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 45.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 45.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 45.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 45.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 45.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 45.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 44.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 44.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 44.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 43.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 43.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 42.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 42.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 42.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 42.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 42.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 42.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 42.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 42.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 42.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 42.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 42.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 41.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 41.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 41.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 41.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 41.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 41.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 41.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 41.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 40.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 40.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 40.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 40.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 40.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 40.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 40.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 40.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 40.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 40.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 39.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 39.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 39.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 39.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 39.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 38.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 38.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 38.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 38.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 38.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 37.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 37.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 37.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 37.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 37.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 37.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 37.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 37.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 37.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 37.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 37.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 37.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 37.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 37.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 37.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 36.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 36.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 36.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 36.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 36.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 36.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 36.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 36.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 35.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 35.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 35.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 35.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 35.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 35.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 35.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 35.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 35.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 35.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 35.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 35.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 35.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 35.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 35.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 34.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 34.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 34.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 34.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 34.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 34.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 34.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 34.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 34.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 34.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 34.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 34.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 34.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 34.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 34.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 34.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 34.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 34.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 34.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 34.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 34.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 34.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 34.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 33.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 33.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 33.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 33.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 33.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 33.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 33.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 33.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 32.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 32.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 32.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 32.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 32.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 32.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 32.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 32.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 32.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 32.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 32.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 32.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 32.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 32.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 32.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 32.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 31.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 31.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 31.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 31.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 31.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 31.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 31.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 31.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 31.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 31.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 31.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 31.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 31.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 30.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 30.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 30.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 30.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 30.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 30.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 30.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 30.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 30.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 30.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 30.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 30.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 30.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 30.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 30.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 30.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 29.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 29.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 29.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 29.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 29.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 29.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 29.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 29.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 29.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 29.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 29.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 29.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 29.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 29.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 29.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 29.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 29.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 29.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 29.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 29.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 28.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 28.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 28.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 28.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 28.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 28.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 28.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 28.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 28.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 28.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 28.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 28.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 28.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 28.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 27.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 27.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 27.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 27.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 27.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 27.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 26.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 26.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 26.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 26.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 26.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 26.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 26.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 26.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 26.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 25.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 25.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 25.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 25.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 25.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 24.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 24.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 24.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 24.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 23.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 23.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 23.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 22.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 22.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 21.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 21.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 20.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 20.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 13.5
Samples: 4

Max nTPM: 14.6
Min nTPM: 11.3
Sample A Female 14.2
Sample B Female 14.6
Sample C Male 13.8
Sample D Male 11.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 8.6
Samples: 4

Max nTPM: 9.4
Min nTPM: 7.9
Sample A Male 8.9
Sample B Male 7.9
Sample C Female 8.0
Sample D Female 9.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 5.2
69173262 Antisense, RP_050329_01_C07, Mouse strain C57BL/6J (56 days, male) 5.2

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