HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:35.2 nTPM
HPA Brain:40.4 nTPM
GTEx:35.2 nTPM
FANTOM5:142.3 Scaled Tags Per Million
Pig:79.3 nTPM
Mouse:34.8 nTPM
Allen mouse:0.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051293
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 40.4
Sample id Sample description nTPM
Hippocampus
nTPM: 40.4
2621 Female, age 67, right hemisphere 68.0
1855 Male, age 76, left hemisphere 45.7
1898 Male, age 80, left hemisphere 43.3
1911 Female, age 85, right hemisphere 33.1
2148 Female, age 91, left hemisphere 26.7
2529 Female, age 94, left hemisphere 25.7
Dentate gyrus
nTPM: 30.1
2010 Male, age 76, both hemispheres 45.6
2531 Female, age 67, both hemispheres 29.0
2246 Female, age 85, both hemispheres 28.6
2528 Male, age 74, both hemispheres 26.8
2530 Female, age 94, left hemisphere 25.6
1927 Female, age 91, both hemispheres 25.1
Entorhinal gyrus
nTPM: 27.8
2117 Female, age 91, right hemisphere 47.7
1787 Male, age 76, left hemisphere 36.7
2613 Female, age 94, left hemisphere 25.1
1938 Female, age 85, left hemisphere 20.8
2764 Male, age 80, right hemisphere 20.0
2686 Male, age 75, right hemisphere 16.3
Hippocampus, CA1
nTPM: 27.5
2045 Male, age 76, both hemispheres 39.0
2082 Female, age 91, right hemisphere 32.1
1873 Female, age 85, both hemispheres 26.7
2527 Male, age 74, both hemispheres 21.6
2749 Male, age 80, left hemisphere 18.2
Hippocampus, CA2
nTPM: 35.7
1940 Female, age 85, left hemisphere 63.8
2437 Female, age 94, left hemisphere 36.2
1892 Male, age 76, both hemispheres 33.7
2113 Female, age 91, right hemisphere 33.7
1963 Male, age 80, left hemisphere 28.9
2249 Male, age 74, both hemispheres 18.0
Hippocampus, CA3
nTPM: 25.3
1867 Male, age 76, both hemispheres 42.8
2861 Female, age 67, both hemispheres 31.0
1891 Female, age 85, both hemispheres 27.4
2436 Male, age 74, both hemispheres 21.6
2137 Male, age 80, left hemisphere 19.9
2620 Female, age 94, left hemisphere 9.2
Parahippocampal cortex
nTPM: 29.5
2250 Female, age 67, right hemisphere 71.8
2018 Male, age 76, both hemispheres 53.0
2693 Female, age 94, both hemispheres 30.3
1990 Female, age 91, right hemisphere 22.6
2532 Female, age 72, left hemisphere 22.6
1850 Male, age 80, both hemispheres 21.8
2245 Female, age 91, both hemispheres 21.7
2692 Male, age 74, both hemispheres 19.2
1933 Female, age 85, both hemispheres 17.1
2622 Female, age 67, right hemisphere 15.4
Perirhinal gyrus
nTPM: 25.6
2521 Female, age 94, right hemisphere 37.7
1841 Female, age 85, right hemisphere 24.5
1794 Male, age 80, right hemisphere 23.4
2848 Male, age 76, right hemisphere 22.6
1847 Female, age 91, left hemisphere 19.7
Subiculum
nTPM: 32.9
2042 Male, age 76, both hemispheres 55.6
2729 Female, age 91, right hemisphere 43.2
1901 Male, age 80, both hemispheres 28.2
2619 Male, age 74, both hemispheres 27.4
2438 Female, age 94, left hemisphere 23.1
1977 Female, age 85, both hemispheres 20.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 35.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.2
Samples: 255

Max nTPM: 217.4
Min nTPM: 2.6
Std nTPM: 29.7
Median nTPM: 27.7
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 217.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 153.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 153.5
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 153.2
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 149.0
GTEX-15RJE-0011-R1b-SM-H6Q7N 40-49 years, male 130.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 117.6
GTEX-1I19N-0011-R1b-SM-GOR1A 70-79 years, male 116.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 106.8
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 103.9
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 97.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 142.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 142.3
FF:10169-103B7 60 years, female 149.5
FF:10153-102I9 76 years, female 135.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 79.3
Pig sample Sample description nTPM
Subiculum
nTPM: 77.4
Samples: 4

Max nTPM: 98.6
Min nTPM: 54.9
Sample A Female 98.6
Sample B Female 86.7
Sample C Male 54.9
Sample D Male 69.3
Dorsal hippocampus
nTPM: 79.3
Samples: 4

Max nTPM: 98.8
Min nTPM: 57.1
Sample A Female 98.8
Sample B Female 72.1
Sample C Male 89.3
Sample D Male 57.1
Entorhinal cortex
nTPM: 51.2
Samples: 4

Max nTPM: 61.1
Min nTPM: 38.6
Sample A Female 51.0
Sample B Female 61.1
Sample C Male 54.1
Sample D Male 38.6
Ventral hippocampus
nTPM: 73.9
Samples: 4

Max nTPM: 75.4
Min nTPM: 72.7
Sample A Female 72.7
Sample B Female 75.4
Sample C Male 74.6
Sample D Male 72.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 34.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.8
Samples: 4

Max nTPM: 40.6
Min nTPM: 28.5
Sample A Male 33.3
Sample B Male 28.5
Sample C Female 36.7
Sample D Female 40.6
Hippocampal formation
nTPM: 33.0
Samples: 4

Max nTPM: 39.1
Min nTPM: 28.8
Sample A Male 39.1
Sample B Male 30.8
Sample C Female 28.8
Sample D Female 33.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
100145372 Antisense, RP_110519_02_F11, Mouse strain C57BL/6J (56 days, male) 0.1

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