HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:353.4 nTPM
HPA Brain:524.2 nTPM
GTEx:353.4 nTPM
FANTOM5:1587.7 Scaled Tags Per Million
Pig:915.1 nTPM
Mouse:727.7 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA075200
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 524.2
Sample id Sample description nTPM
Hippocampus
nTPM: 396.0
1898 Male, age 80, left hemisphere 475.1
2621 Female, age 67, right hemisphere 419.5
1855 Male, age 76, left hemisphere 412.7
2148 Female, age 91, left hemisphere 396.7
2529 Female, age 94, left hemisphere 355.8
1911 Female, age 85, right hemisphere 315.9
Dentate gyrus
nTPM: 438.8
2531 Female, age 67, both hemispheres 724.3
2530 Female, age 94, left hemisphere 448.1
2246 Female, age 85, both hemispheres 415.5
2528 Male, age 74, both hemispheres 389.8
1927 Female, age 91, both hemispheres 328.4
2010 Male, age 76, both hemispheres 326.9
Entorhinal gyrus
nTPM: 351.5
2764 Male, age 80, right hemisphere 428.1
1787 Male, age 76, left hemisphere 362.7
1938 Female, age 85, left hemisphere 343.1
2686 Male, age 75, right hemisphere 340.2
2117 Female, age 91, right hemisphere 338.7
2613 Female, age 94, left hemisphere 296.1
Hippocampus, CA1
nTPM: 374.8
2045 Male, age 76, both hemispheres 585.4
1873 Female, age 85, both hemispheres 403.5
2749 Male, age 80, left hemisphere 365.6
2527 Male, age 74, both hemispheres 302.2
2082 Female, age 91, right hemisphere 217.4
Hippocampus, CA2
nTPM: 358.6
1940 Female, age 85, left hemisphere 509.7
1963 Male, age 80, left hemisphere 415.5
1892 Male, age 76, both hemispheres 353.8
2437 Female, age 94, left hemisphere 323.7
2113 Female, age 91, right hemisphere 279.3
2249 Male, age 74, both hemispheres 269.4
Hippocampus, CA3
nTPM: 427.2
2620 Female, age 94, left hemisphere 773.4
2861 Female, age 67, both hemispheres 589.9
2137 Male, age 80, left hemisphere 419.5
1891 Female, age 85, both hemispheres 299.4
1867 Male, age 76, both hemispheres 283.2
2436 Male, age 74, both hemispheres 197.6
Parahippocampal cortex
nTPM: 435.5
2532 Female, age 72, left hemisphere 627.7
2693 Female, age 94, both hemispheres 528.0
2245 Female, age 91, both hemispheres 513.7
2622 Female, age 67, right hemisphere 472.4
2250 Female, age 67, right hemisphere 455.5
1933 Female, age 85, both hemispheres 430.7
1850 Male, age 80, both hemispheres 408.9
2018 Male, age 76, both hemispheres 355.6
1990 Female, age 91, right hemisphere 323.3
2692 Male, age 74, both hemispheres 238.6
Perirhinal gyrus
nTPM: 524.2
1841 Female, age 85, right hemisphere 625.1
1794 Male, age 80, right hemisphere 622.5
2521 Female, age 94, right hemisphere 608.4
2848 Male, age 76, right hemisphere 498.9
1847 Female, age 91, left hemisphere 266.0
Subiculum
nTPM: 290.2
1977 Female, age 85, both hemispheres 343.6
2729 Female, age 91, right hemisphere 328.6
2619 Male, age 74, both hemispheres 318.1
1901 Male, age 80, both hemispheres 274.1
2042 Male, age 76, both hemispheres 261.3
2438 Female, age 94, left hemisphere 215.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 353.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 353.4
Samples: 255

Max nTPM: 1227.4
Min nTPM: 110.2
Std nTPM: 174.2
Median nTPM: 305.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 1227.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1105.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 923.8
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 921.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 921.6
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 904.4
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 873.8
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 853.2
GTEX-1RQEC-0011-R1b-SM-F2I2E 60-69 years, male 781.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 757.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 748.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1587.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1587.7
FF:10169-103B7 60 years, female 1920.3
FF:10153-102I9 76 years, female 1255.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 915.1
Pig sample Sample description nTPM
Subiculum
nTPM: 487.2
Samples: 4

Max nTPM: 639.4
Min nTPM: 317.1
Sample A Female 639.4
Sample B Female 461.2
Sample C Male 317.1
Sample D Male 531.2
Dorsal hippocampus
nTPM: 395.2
Samples: 4

Max nTPM: 506.3
Min nTPM: 267.5
Sample A Female 506.3
Sample B Female 463.5
Sample C Male 267.5
Sample D Male 343.3
Entorhinal cortex
nTPM: 915.1
Samples: 4

Max nTPM: 1100.9
Min nTPM: 758.9
Sample A Female 1100.9
Sample B Female 853.9
Sample C Male 946.8
Sample D Male 758.9
Ventral hippocampus
nTPM: 355.4
Samples: 4

Max nTPM: 411.2
Min nTPM: 285.7
Sample A Female 384.2
Sample B Female 285.7
Sample C Male 340.4
Sample D Male 411.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 727.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 727.7
Samples: 4

Max nTPM: 949.2
Min nTPM: 540.6
Sample A Male 844.7
Sample B Male 949.2
Sample C Female 540.6
Sample D Female 576.2
Hippocampal formation
nTPM: 320.9
Samples: 4

Max nTPM: 443.0
Min nTPM: 275.6
Sample A Male 443.0
Sample B Male 286.3
Sample C Female 275.6
Sample D Female 278.7

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo