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  • SUMMARY

  • TISSUE

  • BRAIN

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  • STRUCTURE

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  • CADM3
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

175.755
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:96.6 nTPM
HPA Brain:239.9 nTPM
GTEx:96.6 nTPM
Pig:120.1 nTPM
Mouse:191.9 nTPM
Allen mouse:11.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody CAB025746
Hypothalamus mean intensity 175.755
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 83.094
Mammillary nucleus 48.168
Periventricular hypothalamic nucleus 175.755
Supraoptic nucleus 112.191
Tuberal nucleus 112.421
Ventral tuberomammillary nucleus 115.837
Lateral preoptic area -
Medial preoptic area -
Suprachiasmatic nucleus -
Paraventricular hypothalamic nucleus 64.773
Anterior hypothalamic area, central 64.127
Ventral medial hypothalamic nucleus 87.950
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 140.797
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 56.299
Dorsal medial hypothalamic nucleus 75.066
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

239.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 221.6
2226 Male, age 75, left hemisphere 233.6
1961 Female, age 42, unknown 209.6
Dorsomedial nucleus
nTPM: 170.1
1989 Male, age 62, unknown 184.6
2041 Female, age 72, unknown 173.3
2017 Female, age 42, unknown 152.5
Lateral hypothalamic area
nTPM: 237.6
1791 Male, age 80, right hemisphere 279.4
2271 Male, age 75, both hemispheres 271.7
2228 Male, age 66, unknown 219.2
2412 Male, age 62, unknown 180.4
Mammillary body
nTPM: 127.9
1923 Female, age 72, unknown 160.5
2413 Male, age 66, unknown 132.3
1948 Female, age 72, unknown 129.2
1834 Female, age 42, unknown 111.0
1945 Male, age 80, right hemisphere 106.6
Paraventricular nucleus
nTPM: 170.8
2700 Male, age 62, unknown 170.8
Preoptic area
nTPM: 162.6
1907 Male, age 80, right hemisphere 201.0
1861 Female, age 42, unknown 147.3
2414 Female, age 72, unknown 139.4
Supraoptic nucleus
nTPM: 189.8
2835 Female, age 72, unknown 219.7
2043 Male, age 62, unknown 188.5
1894 Female, age 72, unknown 161.1
Ventromedial nucleus
nTPM: 239.9
1982 Female, age 72, unknown 271.4
1822 Female, age 42, unknown 208.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

96.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 96.6
Samples: 257

Max nTPM: 202.8
Min nTPM: 22.3
Std nTPM: 37.6
Median nTPM: 94.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 202.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 197.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 187.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 185.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 184.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 180.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 175.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 173.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 173.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 163.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 159.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 159.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 159.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 157.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 156.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 155.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 151.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 151.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 150.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 150.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 149.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 149.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 149.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 149.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 147.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 146.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 144.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 144.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 143.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 143.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 141.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 141.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 141.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 141.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 140.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 140.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 139.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 139.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 139.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 139.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 139.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 138.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 137.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 137.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 137.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 135.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 134.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 134.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 133.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 133.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 133.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 132.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 131.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 131.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 131.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 130.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 129.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 129.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 128.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 128.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 128.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 124.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 123.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 123.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 123.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 123.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 123.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 121.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 121.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 121.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 119.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 119.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 119.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 118.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 116.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 116.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 115.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 114.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 114.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 114.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 113.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 113.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 111.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 109.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 109.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 109.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 109.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 108.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 107.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 107.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 107.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 107.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 106.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 106.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 106.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 106.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 105.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 105.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 105.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 103.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 103.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 103.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 102.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 102.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 101.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 101.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 101.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 101.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 100.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 100.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 100.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 99.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 99.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 98.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 98.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 97.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 97.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 96.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 96.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 96.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 95.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 95.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 95.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 95.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 95.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 95.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 95.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 94.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 94.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 93.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 93.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 93.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 93.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 93.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 92.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 92.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 92.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 92.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 91.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 91.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 89.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 89.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 89.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 89.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 88.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 88.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 88.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 88.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 88.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 88.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 87.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 87.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 87.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 87.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 87.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 86.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 86.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 85.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 85.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 85.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 84.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 84.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 84.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 83.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 82.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 82.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 81.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 80.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 80.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 80.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 79.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 79.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 79.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 79.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 78.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 78.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 78.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 77.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 77.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 76.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 75.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 74.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 72.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 72.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 72.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 71.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 71.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 70.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 70.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 70.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 68.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 68.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 68.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 68.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 68.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 67.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 66.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 65.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 65.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 65.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 64.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 64.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 64.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 63.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 62.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 62.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 61.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 61.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 61.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 60.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 60.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 60.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 59.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 59.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 59.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 57.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 57.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 57.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 55.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 55.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 54.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 54.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 53.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 52.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 52.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 51.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 51.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 50.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 49.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 49.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 49.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 49.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 47.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 46.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 46.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 45.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 44.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 44.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 43.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 41.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 39.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 39.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 36.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 36.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 34.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 34.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 31.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 30.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 30.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 29.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 29.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 27.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 27.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 25.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 23.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 23.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 22.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

120.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 120.1
Samples: 4

Max nTPM: 155.2
Min nTPM: 98.8
Sample A Female 155.2
Sample B Female 105.9
Sample C Male 120.5
Sample D Male 98.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

191.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 192.0
Samples: 4

Max nTPM: 199.9
Min nTPM: 178.0
Sample A Male 193.5
Sample B Male 199.9
Sample C Female 196.5
Sample D Female 178.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 11.7
69169911 Antisense, RP_050321_04_D11, Mouse strain C57BL/6J (56 days, male) 11.7

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