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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • RPL9
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN72 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX
FRONTAL CORTEX FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS
MIDDLE TEMPORAL GYRUS MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX
SEPTAL AREA SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:70.9 nTPM
GTEx:969.9 nTPM
FANTOM5:32.2 Scaled Tags Per Million
Macaque:7.3 nTPM
Pig:21.7 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.9
Sample id Sample description nTPM
Putamen
nTPM: 70.9
2466 Female, age 79, unknown 87.7
1937 Female, age 91, right hemisphere 82.0
2482 Female, age 94, left hemisphere 77.8
2647 Male, age 75, left hemisphere 71.9
1829 Male, age 74, unknown 64.3
1838 Male, age 80, right hemisphere 58.0
2489 Female, age 72, unknown 54.8

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

969.9
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 969.9
Samples: 254

Max nTPM: 2747.4
Min nTPM: 401.8
Std nTPM: 330.5
Median nTPM: 905.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 2747.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1981.7
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 1974.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1955.5
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 1844.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1736.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1673.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 1652.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1642.8
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 1636.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1630.3
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 1597.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1591.2
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 1583.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1578.4
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 1575.9
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 1570.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1560.5
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 1537.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1521.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1515.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1511.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1474.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1455.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1437.5
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 1423.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1406.9
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 1405.7
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 1394.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 1393.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1392.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1373.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1363.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1351.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1350.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1344.1
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 1333.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1321.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1314.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1308.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1307.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1303.5
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 1294.8
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 1288.3
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 1264.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1248.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1248.2
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 1243.0
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 1239.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1234.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1234.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 1229.9
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 1215.5
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 1213.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 1210.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 1208.4
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 1188.7
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 1180.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1174.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1160.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1152.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 1142.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1137.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1137.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1129.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1126.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1117.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1116.2
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 1097.2
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 1091.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1088.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 1078.3
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 1068.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 1061.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 1054.6
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 1053.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1052.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1047.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1045.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1040.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1029.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 1025.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 1015.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1009.0
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 1008.9
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 1008.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 1007.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1003.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 999.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 997.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 996.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 995.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 990.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 983.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 981.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 979.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 979.6
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 977.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 972.2
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 968.8
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 961.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 960.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 955.8
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 954.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 952.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 950.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 946.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 946.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 946.4
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 945.7
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 944.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 941.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 936.7
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 935.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 934.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 931.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 930.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 927.9
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 924.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 922.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 921.4
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 915.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 913.1
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 910.8
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 908.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 908.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 907.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 902.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 898.4
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 897.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 895.4
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 893.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 890.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 888.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 886.3
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 885.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 879.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 875.5
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 872.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 871.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 868.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 868.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 867.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 866.1
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 862.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 854.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 849.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 840.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 837.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 835.2
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 832.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 829.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 827.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 826.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 822.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 820.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 817.2
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 816.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 816.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 814.7
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 807.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 805.6
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 805.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 801.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 796.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 796.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 795.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 794.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 793.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 790.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 788.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 784.1
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 781.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 781.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 779.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 777.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 776.0
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 769.6
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 761.2
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 759.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 759.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 757.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 756.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 755.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 753.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 749.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 748.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 748.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 748.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 747.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 744.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 744.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 743.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 743.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 739.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 731.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 727.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 725.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 722.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 720.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 719.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 715.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 713.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 713.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 712.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 709.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 708.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 707.8
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 703.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 703.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 700.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 693.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 691.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 687.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 683.8
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 682.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 671.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 669.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 668.7
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 667.6
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 667.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 666.2
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 635.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 633.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 631.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 629.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 629.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 626.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 619.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 613.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 609.9
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 608.6
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 605.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 603.2
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 580.9
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 573.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 573.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 571.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 570.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 568.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 558.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 549.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 548.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 544.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 538.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 535.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 532.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 524.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 499.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 496.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 478.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 474.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 460.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 401.8
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

32.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 32.2
FF:10176-103C5 60 years, female 32.2

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7.3
Macaque sample Sample description nTPM
Putamen
nTPM: 7.4
Samples: 2

Max nTPM: 7.5
Min nTPM: 7.2
Sample A 7.2
Sample B 7.5

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.7
Pig sample Sample description nTPM
Putamen
nTPM: 21.7
Samples: 3

Max nTPM: 25.1
Min nTPM: 18.8
Sample B Female 18.8
Sample C Male 25.1
Sample D Male 21.3

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