HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:22.4 nTPM
HPA Brain:15.5 nTPM
GTEx:22.4 nTPM
FANTOM5:155.0 Scaled Tags Per Million
Pig:18.2 nTPM
Mouse:137.8 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012882
Glial cells Not detected
Neuronal cells Low

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 15.5
Sample id Sample description nTPM
Hippocampus
nTPM: 15.5
1911 Female, age 85, right hemisphere 16.9
1855 Male, age 76, left hemisphere 16.5
2148 Female, age 91, left hemisphere 16.3
2529 Female, age 94, left hemisphere 15.3
1898 Male, age 80, left hemisphere 14.8
2621 Female, age 67, right hemisphere 13.2
Dentate gyrus
nTPM: 13.4
2246 Female, age 85, both hemispheres 15.1
2528 Male, age 74, both hemispheres 15.1
2010 Male, age 76, both hemispheres 14.8
1927 Female, age 91, both hemispheres 14.6
2530 Female, age 94, left hemisphere 10.9
2531 Female, age 67, both hemispheres 9.8
Entorhinal gyrus
nTPM: 12.5
2117 Female, age 91, right hemisphere 16.1
1938 Female, age 85, left hemisphere 14.1
1787 Male, age 76, left hemisphere 12.9
2764 Male, age 80, right hemisphere 10.9
2613 Female, age 94, left hemisphere 10.6
2686 Male, age 75, right hemisphere 10.4
Hippocampus, CA1
nTPM: 14.9
1873 Female, age 85, both hemispheres 17.2
2527 Male, age 74, both hemispheres 16.6
2045 Male, age 76, both hemispheres 14.8
2082 Female, age 91, right hemisphere 14.8
2749 Male, age 80, left hemisphere 11.3
Hippocampus, CA2
nTPM: 14.8
2249 Male, age 74, both hemispheres 16.4
2113 Female, age 91, right hemisphere 16.1
1963 Male, age 80, left hemisphere 14.8
1892 Male, age 76, both hemispheres 14.0
1940 Female, age 85, left hemisphere 13.7
2437 Female, age 94, left hemisphere 13.7
Hippocampus, CA3
nTPM: 12.7
1891 Female, age 85, both hemispheres 15.9
2436 Male, age 74, both hemispheres 14.8
1867 Male, age 76, both hemispheres 13.9
2137 Male, age 80, left hemisphere 11.1
2620 Female, age 94, left hemisphere 11.1
2861 Female, age 67, both hemispheres 9.6
Parahippocampal cortex
nTPM: 14.0
2018 Male, age 76, both hemispheres 15.7
1933 Female, age 85, both hemispheres 15.4
2250 Female, age 67, right hemisphere 15.0
2692 Male, age 74, both hemispheres 14.8
2693 Female, age 94, both hemispheres 14.1
2532 Female, age 72, left hemisphere 13.3
2245 Female, age 91, both hemispheres 13.2
2622 Female, age 67, right hemisphere 13.2
1990 Female, age 91, right hemisphere 12.8
1850 Male, age 80, both hemispheres 12.4
Perirhinal gyrus
nTPM: 13.3
1841 Female, age 85, right hemisphere 14.9
2521 Female, age 94, right hemisphere 14.5
1847 Female, age 91, left hemisphere 12.8
1794 Male, age 80, right hemisphere 12.4
2848 Male, age 76, right hemisphere 11.6
Subiculum
nTPM: 14.5
2729 Female, age 91, right hemisphere 19.0
2042 Male, age 76, both hemispheres 15.0
2438 Female, age 94, left hemisphere 13.8
2619 Male, age 74, both hemispheres 13.8
1977 Female, age 85, both hemispheres 13.2
1901 Male, age 80, both hemispheres 12.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 22.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.4
Samples: 255

Max nTPM: 53.3
Min nTPM: 6.9
Std nTPM: 8.7
Median nTPM: 20.7
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 53.3
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 52.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 47.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 46.1
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 45.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 45.5
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 44.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 43.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 42.6
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 42.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 41.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 155.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 155.0
FF:10153-102I9 76 years, female 167.7
FF:10169-103B7 60 years, female 142.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 18.2
Pig sample Sample description nTPM
Subiculum
nTPM: 15.3
Samples: 4

Max nTPM: 18.8
Min nTPM: 14.0
Sample A Female 18.8
Sample B Female 14.1
Sample C Male 14.0
Sample D Male 14.1
Dorsal hippocampus
nTPM: 18.2
Samples: 4

Max nTPM: 22.4
Min nTPM: 14.9
Sample A Female 22.4
Sample B Female 15.2
Sample C Male 20.3
Sample D Male 14.9
Entorhinal cortex
nTPM: 15.5
Samples: 4

Max nTPM: 17.3
Min nTPM: 13.3
Sample A Female 14.6
Sample B Female 17.3
Sample C Male 16.6
Sample D Male 13.3
Ventral hippocampus
nTPM: 15.7
Samples: 4

Max nTPM: 19.6
Min nTPM: 12.6
Sample A Female 19.6
Sample B Female 15.7
Sample C Male 12.6
Sample D Male 14.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 137.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 136.1
Samples: 4

Max nTPM: 176.8
Min nTPM: 109.5
Sample A Male 123.5
Sample B Male 109.5
Sample C Female 176.8
Sample D Female 134.7
Hippocampal formation
nTPM: 137.8
Samples: 4

Max nTPM: 156.7
Min nTPM: 118.9
Sample A Male 156.7
Sample B Male 118.9
Sample C Female 137.8
Sample D Female 137.7

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