We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SCRG1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • SCRG1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:17.5 nTPM
HPA Brain:17.7 nTPM
GTEx:17.5 nTPM
Pig:20.5 nTPM
Mouse:98.8 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

17.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 11.9
2226 Male, age 75, left hemisphere 12.0
1961 Female, age 42, unknown 11.8
Dorsomedial nucleus
nTPM: 13.6
2017 Female, age 42, unknown 14.9
1989 Male, age 62, unknown 14.3
2041 Female, age 72, unknown 11.7
Lateral hypothalamic area
nTPM: 12.1
2271 Male, age 75, both hemispheres 14.5
1791 Male, age 80, right hemisphere 13.2
2412 Male, age 62, unknown 11.0
2228 Male, age 66, unknown 9.8
Mammillary body
nTPM: 15.9
1834 Female, age 42, unknown 17.3
1945 Male, age 80, right hemisphere 16.9
2413 Male, age 66, unknown 16.6
1948 Female, age 72, unknown 15.2
1923 Female, age 72, unknown 13.6
Paraventricular nucleus
nTPM: 11.4
2700 Male, age 62, unknown 11.4
Preoptic area
nTPM: 13.8
2414 Female, age 72, unknown 14.9
1861 Female, age 42, unknown 13.8
1907 Male, age 80, right hemisphere 12.5
Supraoptic nucleus
nTPM: 17.7
2043 Male, age 62, unknown 21.2
1894 Female, age 72, unknown 20.1
2835 Female, age 72, unknown 11.9
Ventromedial nucleus
nTPM: 11.7
1822 Female, age 42, unknown 12.2
1982 Female, age 72, unknown 11.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

17.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 17.5
Samples: 257

Max nTPM: 65.2
Min nTPM: 5.0
Std nTPM: 8.4
Median nTPM: 15.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 65.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 47.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 43.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 43.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 41.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 40.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 39.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 39.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 38.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 36.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 35.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 35.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 34.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 34.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 34.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 33.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 32.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 31.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 31.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 31.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 30.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 30.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 29.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 29.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 29.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 28.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 28.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 28.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 28.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 27.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 27.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 27.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 27.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 27.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 26.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 26.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 26.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 26.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 25.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 25.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 24.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 24.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 24.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 24.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 24.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 23.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 23.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 23.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 22.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 22.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 22.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 22.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 22.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 22.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 22.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 22.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 21.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 21.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 21.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 21.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 21.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 21.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 21.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 21.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 21.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 20.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 20.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 20.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 20.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 20.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 20.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 20.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 20.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 19.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 19.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 19.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 19.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 19.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 19.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 18.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 18.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 18.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 18.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 18.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 18.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 18.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 18.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 18.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 17.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 17.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 17.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 17.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 17.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 17.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 17.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 17.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 17.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 17.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 17.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 17.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 17.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 17.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 17.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 17.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 17.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 16.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 16.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 16.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 16.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 16.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 16.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 16.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 16.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 16.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 16.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 16.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 16.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 16.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 16.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 16.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 16.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 16.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 16.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 16.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 16.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 16.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 15.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 15.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 15.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 15.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 15.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 15.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 15.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 15.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 15.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 15.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 15.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 15.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 15.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 15.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 15.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 15.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 15.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 14.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 14.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 14.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 14.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 14.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 14.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 14.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 14.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 14.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 14.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 14.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 13.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 13.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 13.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 13.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 13.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 13.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 13.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 13.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 13.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 13.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 13.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 13.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 12.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 12.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 12.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 12.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 12.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 12.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 12.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 12.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 12.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 12.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 12.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 12.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 12.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 12.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 12.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 12.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 12.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 12.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 11.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 11.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 11.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 11.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 11.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 11.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 11.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 11.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 11.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 11.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 11.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 11.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 11.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 11.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 11.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 11.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 11.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 11.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 11.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 11.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 10.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 10.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 10.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 10.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 10.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 10.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 10.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 10.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 10.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 10.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 10.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 10.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 10.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 10.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 10.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 10.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 9.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 9.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 9.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 9.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 9.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 9.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 9.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 9.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 9.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 9.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 9.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 9.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 9.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 9.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 9.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 9.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 8.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 8.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 8.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 8.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 8.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 8.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 8.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 8.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 7.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 7.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 7.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 7.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 7.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 7.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 7.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 6.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 6.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 6.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 5.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 5.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 5.0
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

20.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 20.5
Samples: 4

Max nTPM: 24.6
Min nTPM: 15.4
Sample A Female 23.9
Sample B Female 24.6
Sample C Male 18.0
Sample D Male 15.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

98.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 98.8
Samples: 4

Max nTPM: 108.9
Min nTPM: 69.0
Sample A Male 69.0
Sample B Male 108.6
Sample C Female 108.6
Sample D Female 108.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo