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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:300.1 nTPM
HPA Brain:190.4 nTPM
GTEx:300.1 nTPM
Pig:104.5 nTPM
Mouse:139.6 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

190.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 116.7
2226 Male, age 75, left hemisphere 156.0
1961 Female, age 42, unknown 77.5
Dorsomedial nucleus
nTPM: 95.9
1989 Male, age 62, unknown 111.9
2041 Female, age 72, unknown 101.1
2017 Female, age 42, unknown 74.8
Lateral hypothalamic area
nTPM: 140.7
1791 Male, age 80, right hemisphere 176.0
2228 Male, age 66, unknown 153.7
2271 Male, age 75, both hemispheres 144.2
2412 Male, age 62, unknown 89.1
Mammillary body
nTPM: 190.4
1923 Female, age 72, unknown 329.3
2413 Male, age 66, unknown 170.1
1948 Female, age 72, unknown 164.5
1834 Female, age 42, unknown 147.9
1945 Male, age 80, right hemisphere 140.1
Paraventricular nucleus
nTPM: 79.8
2700 Male, age 62, unknown 79.8
Preoptic area
nTPM: 112.6
1907 Male, age 80, right hemisphere 144.0
1861 Female, age 42, unknown 107.4
2414 Female, age 72, unknown 86.3
Supraoptic nucleus
nTPM: 142.2
1894 Female, age 72, unknown 189.7
2043 Male, age 62, unknown 141.3
2835 Female, age 72, unknown 95.6
Ventromedial nucleus
nTPM: 85.8
1982 Female, age 72, unknown 93.6
1822 Female, age 42, unknown 78.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

300.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 300.1
Samples: 257

Max nTPM: 695.1
Min nTPM: 146.0
Std nTPM: 89.1
Median nTPM: 281.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 695.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 683.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 671.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 626.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 565.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 553.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 527.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 505.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 503.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 501.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 496.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 494.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 492.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 481.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 472.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 469.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 464.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 461.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 454.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 451.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 442.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 430.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 430.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 429.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 420.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 419.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 409.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 409.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 405.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 394.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 391.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 389.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 387.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 382.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 379.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 379.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 378.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 376.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 374.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 370.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 366.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 363.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 361.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 361.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 360.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 354.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 354.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 352.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 350.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 346.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 345.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 344.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 344.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 342.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 341.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 336.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 335.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 335.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 335.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 335.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 333.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 333.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 332.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 332.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 331.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 330.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 330.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 330.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 328.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 328.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 327.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 324.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 323.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 323.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 322.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 322.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 321.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 317.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 317.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 316.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 315.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 312.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 311.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 311.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 311.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 310.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 309.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 307.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 306.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 306.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 306.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 306.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 305.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 305.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 305.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 303.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 303.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 302.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 302.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 302.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 301.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 301.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 301.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 300.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 300.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 300.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 299.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 299.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 296.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 295.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 295.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 294.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 293.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 291.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 291.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 290.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 287.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 286.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 286.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 285.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 284.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 284.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 284.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 283.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 283.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 283.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 282.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 282.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 281.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 281.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 280.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 279.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 278.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 278.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 278.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 277.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 276.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 276.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 275.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 274.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 272.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 272.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 271.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 270.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 270.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 268.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 267.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 266.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 266.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 265.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 265.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 264.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 264.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 264.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 263.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 263.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 262.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 262.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 261.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 261.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 260.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 260.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 259.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 259.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 258.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 257.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 257.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 257.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 256.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 256.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 255.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 254.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 254.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 254.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 253.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 252.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 251.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 251.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 250.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 250.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 249.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 249.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 249.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 249.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 248.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 248.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 247.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 246.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 245.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 244.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 244.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 244.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 243.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 242.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 242.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 241.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 241.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 240.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 240.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 240.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 239.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 239.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 238.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 236.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 236.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 235.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 235.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 235.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 235.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 235.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 235.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 234.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 233.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 233.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 233.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 232.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 232.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 230.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 229.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 229.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 229.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 228.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 223.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 222.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 222.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 222.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 218.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 217.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 216.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 216.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 214.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 213.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 210.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 208.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 202.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 202.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 201.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 199.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 198.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 197.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 196.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 195.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 195.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 194.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 194.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 193.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 193.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 190.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 189.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 188.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 188.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 178.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 173.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 172.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 163.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 158.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 146.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

104.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 104.5
Samples: 4

Max nTPM: 138.8
Min nTPM: 67.2
Sample A Female 138.8
Sample B Female 116.7
Sample C Male 95.1
Sample D Male 67.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

139.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 139.6
Samples: 4

Max nTPM: 192.1
Min nTPM: 106.4
Sample A Male 148.6
Sample B Male 192.1
Sample C Female 111.4
Sample D Female 106.4

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