HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:762.1 nTPM
HPA Brain:321.2 nTPM
GTEx:762.1 nTPM
FANTOM5:22.7 Scaled Tags Per Million
Pig:668.8 nTPM
Mouse:1314.4 nTPM
Allen mouse:13.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018504
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 321.2
Sample id Sample description nTPM
Hippocampus
nTPM: 321.2
1898 Male, age 80, left hemisphere 368.5
2529 Female, age 94, left hemisphere 349.5
2621 Female, age 67, right hemisphere 342.5
1855 Male, age 76, left hemisphere 313.8
1911 Female, age 85, right hemisphere 313.0
2148 Female, age 91, left hemisphere 239.9
Dentate gyrus
nTPM: 302.3
2530 Female, age 94, left hemisphere 398.9
2010 Male, age 76, both hemispheres 334.6
2246 Female, age 85, both hemispheres 285.9
1927 Female, age 91, both hemispheres 272.6
2531 Female, age 67, both hemispheres 262.2
2528 Male, age 74, both hemispheres 259.4
Entorhinal gyrus
nTPM: 297.1
1787 Male, age 76, left hemisphere 330.3
2686 Male, age 75, right hemisphere 329.7
1938 Female, age 85, left hemisphere 299.1
2764 Male, age 80, right hemisphere 294.3
2117 Female, age 91, right hemisphere 289.4
2613 Female, age 94, left hemisphere 240.0
Hippocampus, CA1
nTPM: 292.4
1873 Female, age 85, both hemispheres 302.4
2045 Male, age 76, both hemispheres 302.0
2749 Male, age 80, left hemisphere 301.4
2082 Female, age 91, right hemisphere 288.9
2527 Male, age 74, both hemispheres 267.1
Hippocampus, CA2
nTPM: 303.3
2437 Female, age 94, left hemisphere 342.0
1963 Male, age 80, left hemisphere 331.3
1940 Female, age 85, left hemisphere 311.9
1892 Male, age 76, both hemispheres 291.5
2249 Male, age 74, both hemispheres 275.8
2113 Female, age 91, right hemisphere 267.2
Hippocampus, CA3
nTPM: 274.7
1867 Male, age 76, both hemispheres 332.7
2861 Female, age 67, both hemispheres 303.2
1891 Female, age 85, both hemispheres 284.5
2137 Male, age 80, left hemisphere 261.9
2436 Male, age 74, both hemispheres 260.7
2620 Female, age 94, left hemisphere 205.2
Parahippocampal cortex
nTPM: 284.5
2018 Male, age 76, both hemispheres 348.8
1850 Male, age 80, both hemispheres 319.6
1933 Female, age 85, both hemispheres 319.6
2250 Female, age 67, right hemisphere 309.7
1990 Female, age 91, right hemisphere 288.7
2245 Female, age 91, both hemispheres 273.2
2532 Female, age 72, left hemisphere 262.1
2692 Male, age 74, both hemispheres 252.3
2622 Female, age 67, right hemisphere 247.8
2693 Female, age 94, both hemispheres 223.2
Perirhinal gyrus
nTPM: 315.5
1841 Female, age 85, right hemisphere 355.3
1847 Female, age 91, left hemisphere 346.4
1794 Male, age 80, right hemisphere 336.2
2521 Female, age 94, right hemisphere 273.6
2848 Male, age 76, right hemisphere 265.8
Subiculum
nTPM: 297.0
2042 Male, age 76, both hemispheres 356.6
1977 Female, age 85, both hemispheres 309.8
1901 Male, age 80, both hemispheres 302.3
2438 Female, age 94, left hemisphere 281.5
2729 Female, age 91, right hemisphere 267.3
2619 Male, age 74, both hemispheres 264.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 762.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 762.1
Samples: 255

Max nTPM: 2171.6
Min nTPM: 339.5
Std nTPM: 258.2
Median nTPM: 700.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2171.6
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 1949.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1643.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1604.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1593.9
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 1464.0
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 1356.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1321.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 1310.2
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 1259.7
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 1237.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 22.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.7
FF:10153-102I9 76 years, female 28.8
FF:10169-103B7 60 years, female 16.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 668.8
Pig sample Sample description nTPM
Subiculum
nTPM: 550.7
Samples: 4

Max nTPM: 732.5
Min nTPM: 463.8
Sample A Female 732.5
Sample B Female 537.1
Sample C Male 463.8
Sample D Male 469.4
Dorsal hippocampus
nTPM: 668.8
Samples: 4

Max nTPM: 867.5
Min nTPM: 475.9
Sample A Female 867.5
Sample B Female 588.8
Sample C Male 743.1
Sample D Male 475.9
Entorhinal cortex
nTPM: 604.2
Samples: 4

Max nTPM: 718.9
Min nTPM: 492.5
Sample A Female 541.0
Sample B Female 664.3
Sample C Male 718.9
Sample D Male 492.5
Ventral hippocampus
nTPM: 608.2
Samples: 4

Max nTPM: 758.1
Min nTPM: 460.4
Sample A Female 558.7
Sample B Female 460.4
Sample C Male 758.1
Sample D Male 655.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 1314.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1213.0
Samples: 4

Max nTPM: 1281.2
Min nTPM: 1144.9
Sample A Male 1251.0
Sample B Male 1175.0
Sample C Female 1281.2
Sample D Female 1144.9
Hippocampal formation
nTPM: 1314.4
Samples: 4

Max nTPM: 1434.1
Min nTPM: 1184.9
Sample A Male 1434.1
Sample B Male 1184.9
Sample C Female 1311.6
Sample D Female 1327.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 13.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.2
69012777 Antisense, RP_050309_01_E01, Mouse strain C57BL/6J (56 days, male) 13.2

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