HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:192.8 nTPM
HPA Brain:227.0 nTPM
GTEx:192.8 nTPM
FANTOM5:409.6 Scaled Tags Per Million
Pig:101.3 nTPM
Mouse:197.8 nTPM
Allen mouse:2.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027132
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 227.0
Sample id Sample description nTPM
Hippocampus
nTPM: 227.0
2148 Female, age 91, left hemisphere 274.2
1898 Male, age 80, left hemisphere 239.4
2529 Female, age 94, left hemisphere 233.1
1911 Female, age 85, right hemisphere 223.6
2621 Female, age 67, right hemisphere 215.2
1855 Male, age 76, left hemisphere 176.9
Dentate gyrus
nTPM: 207.9
2530 Female, age 94, left hemisphere 231.5
2528 Male, age 74, both hemispheres 223.7
1927 Female, age 91, both hemispheres 212.7
2531 Female, age 67, both hemispheres 201.1
2246 Female, age 85, both hemispheres 189.6
2010 Male, age 76, both hemispheres 188.8
Entorhinal gyrus
nTPM: 180.2
2117 Female, age 91, right hemisphere 227.8
2686 Male, age 75, right hemisphere 193.3
2764 Male, age 80, right hemisphere 181.3
1938 Female, age 85, left hemisphere 179.5
1787 Male, age 76, left hemisphere 160.6
2613 Female, age 94, left hemisphere 138.7
Hippocampus, CA1
nTPM: 211.9
2749 Male, age 80, left hemisphere 281.6
1873 Female, age 85, both hemispheres 219.3
2527 Male, age 74, both hemispheres 214.8
2045 Male, age 76, both hemispheres 192.6
2082 Female, age 91, right hemisphere 150.9
Hippocampus, CA2
nTPM: 194.7
1963 Male, age 80, left hemisphere 244.5
2437 Female, age 94, left hemisphere 207.1
2249 Male, age 74, both hemispheres 199.8
2113 Female, age 91, right hemisphere 186.0
1940 Female, age 85, left hemisphere 174.6
1892 Male, age 76, both hemispheres 156.5
Hippocampus, CA3
nTPM: 201.0
2861 Female, age 67, both hemispheres 267.5
2137 Male, age 80, left hemisphere 211.9
2620 Female, age 94, left hemisphere 207.9
1867 Male, age 76, both hemispheres 189.7
1891 Female, age 85, both hemispheres 186.4
2436 Male, age 74, both hemispheres 142.6
Parahippocampal cortex
nTPM: 184.7
2532 Female, age 72, left hemisphere 211.0
1933 Female, age 85, both hemispheres 207.4
2692 Male, age 74, both hemispheres 195.0
2622 Female, age 67, right hemisphere 194.7
2245 Female, age 91, both hemispheres 194.4
1850 Male, age 80, both hemispheres 180.1
2018 Male, age 76, both hemispheres 172.0
2250 Female, age 67, right hemisphere 171.7
1990 Female, age 91, right hemisphere 170.7
2693 Female, age 94, both hemispheres 150.0
Perirhinal gyrus
nTPM: 167.2
1794 Male, age 80, right hemisphere 203.8
1841 Female, age 85, right hemisphere 196.0
1847 Female, age 91, left hemisphere 157.3
2848 Male, age 76, right hemisphere 141.8
2521 Female, age 94, right hemisphere 136.9
Subiculum
nTPM: 182.3
2729 Female, age 91, right hemisphere 239.3
2042 Male, age 76, both hemispheres 182.9
1901 Male, age 80, both hemispheres 182.3
2438 Female, age 94, left hemisphere 164.0
2619 Male, age 74, both hemispheres 163.1
1977 Female, age 85, both hemispheres 162.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 192.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 192.8
Samples: 255

Max nTPM: 425.7
Min nTPM: 73.6
Std nTPM: 66.5
Median nTPM: 180.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 425.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 423.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 417.1
GTEX-11OF3-0011-R1b-SM-H65ZT 60-69 years, male 415.4
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 389.5
GTEX-1LSVX-0011-R1a-SM-F3K5F 60-69 years, male 359.2
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 357.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 347.6
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 344.1
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 331.0
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 324.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 409.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 409.6
FF:10169-103B7 60 years, female 489.1
FF:10153-102I9 76 years, female 330.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 101.3
Pig sample Sample description nTPM
Subiculum
nTPM: 101.3
Samples: 4

Max nTPM: 118.6
Min nTPM: 86.1
Sample A Female 118.6
Sample B Female 113.6
Sample C Male 86.9
Sample D Male 86.1
Dorsal hippocampus
nTPM: 87.7
Samples: 4

Max nTPM: 104.0
Min nTPM: 73.1
Sample A Female 104.0
Sample B Female 88.8
Sample C Male 84.9
Sample D Male 73.1
Entorhinal cortex
nTPM: 91.8
Samples: 4

Max nTPM: 111.3
Min nTPM: 76.6
Sample A Female 76.6
Sample B Female 111.3
Sample C Male 101.3
Sample D Male 77.8
Ventral hippocampus
nTPM: 95.6
Samples: 4

Max nTPM: 108.4
Min nTPM: 88.2
Sample A Female 92.5
Sample B Female 93.2
Sample C Male 108.4
Sample D Male 88.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 197.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 197.8
Samples: 4

Max nTPM: 215.4
Min nTPM: 177.8
Sample A Male 215.4
Sample B Male 213.9
Sample C Female 183.9
Sample D Female 177.8
Hippocampal formation
nTPM: 157.0
Samples: 4

Max nTPM: 189.1
Min nTPM: 138.4
Sample A Male 189.1
Sample B Male 150.3
Sample C Female 138.4
Sample D Female 150.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
69528040 Antisense, RP_050421_03_A03, Mouse strain C57BL/6J (56 days, male) 3.9
73520964 Antisense, RP_051017_04_E04, Mouse strain C57BL/6J (56 days, male) 0.8

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