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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
41.5
nTPM
Monaco:
250.7
nTPM
Schmiedel:
236.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
41.5
HPA sample
nTPM
gdT-cell nTPM: 35.9
Samples: 6
Max nTPM: 47.4
Min nTPM: 28.7
P10809_1007
32.1
P10809_1022
35.0
P10809_1041
33.8
P10809_1060
28.7
P10809_1077
38.5
P10809_1098
47.4
MAIT T-cell nTPM: 41.5
Samples: 6
Max nTPM: 50.7
Min nTPM: 25.6
P10809_1006
45.9
P10809_1024
50.7
P10809_1043
25.6
P10809_1062
39.3
P10809_1083
44.1
P10809_1097
43.6
Memory CD4 T-cell nTPM: 36.1
Samples: 6
Max nTPM: 46.8
Min nTPM: 21.6
P10809_1014
35.9
P10809_1026
30.9
P10809_1045
21.6
P10809_1064
36.9
P10809_1086
46.8
P10809_1113
44.3
Memory CD8 T-cell nTPM: 37.7
Samples: 5
Max nTPM: 48.1
Min nTPM: 22.5
P10809_1012
31.4
P10809_1027
39.4
P10809_1046
22.5
P10809_1065
48.1
P10809_1111
47.1
Naive CD4 T-cell nTPM: 25.4
Samples: 6
Max nTPM: 35.6
Min nTPM: 13.7
P10809_1015
29.0
P10809_1030
29.2
P10809_1049
13.7
P10809_1068
20.7
P10809_1085
35.6
P10809_1112
24.2
Naive CD8 T-cell nTPM: 32.2
Samples: 6
Max nTPM: 52.9
Min nTPM: 21.7
P10809_1016
25.2
P10809_1031
35.6
P10809_1050
25.8
P10809_1069
31.9
P10809_1087
52.9
P10809_1110
21.7
T-reg nTPM: 37.4
Samples: 6
Max nTPM: 48.7
Min nTPM: 30.9
P10809_1018
40.6
P10809_1037
39.5
P10809_1056
30.9
P10809_1075
31.9
P10809_1094
32.6
P10809_1106
48.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
250.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 155.7
Samples: 4
Max nTPM: 185.4
Min nTPM: 134.3
RHH5202_R3573
134.3
RHH5230_R3602
143.0
RHH5259_R3631
185.4
RHH5288_R3660
159.9
Effector memory CD8 T-cell nTPM: 250.7
Samples: 4
Max nTPM: 273.0
Min nTPM: 230.1
RHH5203_R3574
230.1
RHH5231_R3603
232.7
RHH5260_R3632
267.1
RHH5289_R3661
273.0
MAIT T-cell nTPM: 232.7
Samples: 4
Max nTPM: 281.2
Min nTPM: 201.7
RHH5233_R3605
219.1
RHH5205_R3576
228.7
RHH5262_R3634
281.2
RHH5297_R3663
201.7
Memory CD4 T-cell TFH nTPM: 154.9
Samples: 4
Max nTPM: 165.2
Min nTPM: 145.9
RHH5300_R3666
145.9
RHH5236_R3608
165.2
RHH5265_R3637
157.3
RHH5208_R3579
151.2
Memory CD4 T-cell Th1 nTPM: 156.4
Samples: 4
Max nTPM: 188.7
Min nTPM: 122.5
RHH5210_R3581
122.5
RHH5302_R3668
153.7
RHH5238_R3610
160.7
RHH5267_R3639
188.7
Memory CD4 T-cell Th1/Th17 nTPM: 206.1
Samples: 4
Max nTPM: 227.2
Min nTPM: 196.1
RHH5303_R3669
227.2
RHH5211_R3582
196.1
RHH5239_R3611
196.3
RHH5268_R3640
204.7
Memory CD4 T-cell Th17 nTPM: 232.1
Samples: 4
Max nTPM: 278.2
Min nTPM: 152.2
RHH5304_R3670
265.0
RHH5212_R3583
152.2
RHH5240_R3612
278.2
RHH5269_R3641
232.8
Memory CD4 T-cell Th2 nTPM: 180.1
Samples: 4
Max nTPM: 225.9
Min nTPM: 152.5
RHH5305_R3671
160.5
RHH5213_R3584
181.5
RHH5241_R3613
152.5
RHH5270_R3642
225.9
Naive CD4 T-cell nTPM: 122.3
Samples: 4
Max nTPM: 130.6
Min nTPM: 117.7
RHH5306_R3672
120.6
RHH5214_R3585
117.7
RHH5242_R3614
120.1
RHH5271_R3643
130.6
Naive CD8 T-cell nTPM: 107.1
Samples: 4
Max nTPM: 134.8
Min nTPM: 75.2
RHH5201_R3572
75.2
RHH5229_R3601
134.8
RHH5258_R3630
105.5
RHH5287_R3659
112.7
Non-Vd2 gdTCR nTPM: 240.8
Samples: 4
Max nTPM: 271.9
Min nTPM: 206.7
RHH5235_R3607
216.1
RHH5264_R3636
271.9
RHH5207_R3578
268.4
RHH5299_R3665
206.7
T-reg nTPM: 165.1
Samples: 4
Max nTPM: 207.0
Min nTPM: 140.0
RHH5301_R3667
140.0
RHH5237_R3609
207.0
RHH5266_R3638
163.4
RHH5209_R3580
149.9
Terminal effector memory CD4 T-cell nTPM: 227.2
Samples: 2
Max nTPM: 233.3
Min nTPM: 221.1
RHH5243_R3615
221.1
RHH5272_R3644
233.3
Terminal effector memory CD8 T-cell nTPM: 216.7
Samples: 4
Max nTPM: 238.8
Min nTPM: 174.9
RHH5232_R3604
238.7
RHH5204_R3575
174.9
RHH5261_R3633
238.8
RHH5296_R3662
214.2
Vd2 gdTCR nTPM: 202.5
Samples: 4
Max nTPM: 243.4
Min nTPM: 171.3
RHH5234_R3606
175.1
RHH5206_R3577
220.1
RHH5263_R3635
243.4
RHH5298_R3664
171.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.